| Protein: | sel-11 |
| Organism: | Caenorhabditis elegans |
| Length: | 610 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sel-11.
| Description | E-value | Query Range |
Subject Range |
|
|
455.0 | [0..4] | [605..3] |
|
Region A: Residues: [1-211] |
1 11 21 31 41 51
| | | | | |
1 MRVSAGLMIG GSCVATAATI LNAFLINKQF YPSIVYLSKS NASMAVIYVQ GIVLVYLMFQ 60
61 LLKSILFGDL RAAEAEHLSE RTWHAVLETC LAFTVFRDDF SAIFVMQFIG LLFIKCFHWL 120
121 ADDRVDMMER SPVITLRFHL RMMTVLAALG FADSYFVSSA YFTTITRGAS AQIVFGFEYA 180
181 ILLALVLHVT IKYLLHMHDL RNPQSWDNKA V
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [212-333] |
1 11 21 31 41 51
| | | | | |
1 YLLYAELFIN LIRCLLYGFF AVVMLRVHTF PLFSVRPFYQ SVRALHKAFL DVILSRRAIN 60
61 AMNSQFPVVS AEDLAAMDAT CIICREEMTV DASPKRLPCS HVFHAHCLRS WFQRQQTCPT 120
121 CR
|
| Detection Method: | |
| Confidence: | 2.75 |
| Match: | 1u6gB |
| Description: | Crystal Structure of The Cand1-Cul1-Roc1 Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.94076497669492 | bayes_pls_golite062009 |
| transcription regulator activity | 0.668196536186663 | bayes_pls_golite062009 |
| protein binding | 0.667634857392466 | bayes_pls_golite062009 |
| catalytic activity | 0.539151326702765 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29405687339606 | bayes_pls_golite062009 |
|
Region A: Residues: [334-610] |
1 11 21 31 41 51
| | | | | |
1 TDIWQGRNGA AAGGNAADAA ANVADANVAG AQIGAGMPPF LPFLGHQFGF PQQPAGAGGA 60
61 QPGAAQAGGQ PGPFPHQIFY APAPANRPEF MNLIPPPPLP MAGPPGMFPM MPPPPLPQVN 120
121 TTQGTSSETP PVNPSYSQLS TEELRRMEGE SREALLARLQ AMDNIMVLLE SAQMQMIQLA 180
181 TVTPIRPRPV VPSDESEQEA PGPSTDQVTS EEQEIPATSS APSIFRTESP STSSTAPSTS 240
241 SPVTASSTPT TSSTRTPEAE EVRQRRLARL LGENANQ
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
