| Protein: | phy-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 539 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for phy-2.
| Description | E-value | Query Range |
Subject Range |
|
|
361.0 | [0..1] | [524..6] |
|
Region A: Residues: [1-287] |
1 11 21 31 41 51
| | | | | |
1 MRAVLLVCLL AGLAHADLFT AIADLQHMLG AEKDVTTIID QYIEAERARL DDLRRYAHEY 60
61 VHRNAHAESV GPEFVTNPIN AYLLIKRLTT EWKKVENIML NNKASTFLKN ITDNRVRSEV 120
121 KFPGEEDLSG AATALLRLQD TYSLDTLDLS NGIIGGEKVS NKLSGHDTFE VGRSAYNQKD 180
181 YYHCLMWMQV ALVKIENENP PTIEEWEILE YLAYSLYQQG NVRRALSLTK RLAKIAPNHP 240
241 RAKGNVKWYE DMLQGKDMVG DLPPIVNKRV EYDGIVERDA YEALCRG
|
| Detection Method: |  |
| Confidence: | 32.39794 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| procollagen-proline 4-dioxygenase activity | 7.0422525853653 | bayes_pls_golite062009 |
| procollagen-proline dioxygenase activity | 7.0422525853653 | bayes_pls_golite062009 |
| peptidyl-proline dioxygenase activity | 7.0422525853653 | bayes_pls_golite062009 |
| peptidyl-proline 4-dioxygenase activity | 7.0422525853653 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 5.01373106146099 | bayes_pls_golite062009 |
| binding | 2.09193012129784 | bayes_pls_golite062009 |
| protein binding | 1.52807685989528 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH, with oxygen as acceptor | 0.534990536504941 | bayes_pls_golite062009 |
|
Region A: Residues: [288-539] |
1 11 21 31 41 51
| | | | | |
1 EIPPVEPKWK NKLRCYLKRD KPFLKLAPIK VEILRFDPLA VLFKNVIHDS EIEVIKELAS 60
61 PKLKRATVQN SKTGELEHAT YRISKSAWLK GDLDPVIDRV NRRIEDFTNL NQATSEELQV 120
121 ANYGLGGHYD PHFDFARKEE KNAFKTLNTG NRIATVLFYM SQPERGGATV FNHLGTAVFP 180
181 SKNDALFWYN LRRDGEGDLR TRHAACPVLL GVKWVSNKWI HEKGQEFTRP CGLEEEVQEN 240
241 FIGDLSPYAN DP
|
| Detection Method: | |
| Confidence: | 5.45 |
| Match: | 2hbtA |
| Description: | No description for 2hbtA was found. |
