| Protein: | CE05656 |
| Organism: | Caenorhabditis elegans |
| Length: | 398 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05656.
| Description | E-value | Query Range |
Subject Range |
|
|
471.0 | [0..2] | [398..189] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 MTGKLYGNKD NFRTQKVLIA AKLANKTVTL AGDAAPADKF PLGVTPAFEG DALLFGAESI 60
61 GLHLTGTSAN AETVQWLQFA EGYLLPAVLG YVLPSVSAAN FDKKTVEQYK NELNGQLQVL 120
121 DRVLVKKTYL VGERLSLADV SVALDLLPAF QYVLDANARK SIVNVTRWFR TVVNQPAVKE 180
181 VLGEVSLASS
|
| Detection Method: |  |
| Confidence: | 35.09691 |
| Match: | 1aw9A |
| Description: | STRUCTURE OF GLUTATHIONE S-TRANSFERASE III IN APO FORM |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.30799114442278 | bayes_pls_golite062009 |
| nucleic acid binding | 2.06381591939564 | bayes_pls_golite062009 |
| DNA binding | 1.92118545500784 | bayes_pls_golite062009 |
| binding | 1.25802922431343 | bayes_pls_golite062009 |
| transcription activator activity | 1.23146660729357 | bayes_pls_golite062009 |
| protein binding | 1.18479617596618 | bayes_pls_golite062009 |
| catalytic activity | 0.672192331361968 | bayes_pls_golite062009 |
| RNA binding | 0.382017633056715 | bayes_pls_golite062009 |
| 0.359224524631956 | bayes_pls_golite062009 | |
| receptor binding | 0.0497559408754589 | bayes_pls_golite062009 |
|
Region A: Residues: [191-398] |
1 11 21 31 41 51
| | | | | |
1 VAQFNQAKFT ELSAKVAKSA PKAEKPKKEA KPAAAAAQPE DDEPKEEKSK DPFQDMPKGT 60
61 FVLDNFKRSY SNEDTATKAI PHFWENFDAD NWSIWKCEYK YPEDLTLAFM SCNLINGMYQ 120
121 RLEKLKKNAF ASMILFGTDN NSTISGIWVW KGDKLAFELS PDWQVDYESY TWTKLDAKSD 180
181 ATKKEVNEYL MWEGDFGGKK FNQGKIFK
|
| Detection Method: | |
| Confidence: | 71.69897 |
| Match: | 1pbuA |
| Description: | Elongation factor 1-gamma C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation elongation factor activity | 11.9602302019768 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 7.4644014407268 | bayes_pls_golite062009 |
| translation regulator activity | 7.42485540728491 | bayes_pls_golite062009 |
| nucleic acid binding | 3.9329721501879 | bayes_pls_golite062009 |
| binding | 3.0325775548747 | bayes_pls_golite062009 |
| protein binding | 1.65598815428763 | bayes_pls_golite062009 |
