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View Structure Prediction Details

Protein: CE05467
Organism: Caenorhabditis elegans
Length: 756 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05467.

Description E-value Query
Range
Subject
Range
gi|76672649 - gi|76672649|ref|XP_879293.1| PREDICTED: similar to phosphofructokinase, platelet isoform 11 [Bos tau...
826.0 [0..7] [756..22]

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Predicted Domain #1
Region A:
Residues: [1-359]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQKFKKGKD HGVGVLTSGG DSQGMNAAVR SVVRETIRQG HRCYLIREGY NGLINGNIEL  60
   61 AKWAHVANVT HLGGSMIGTS RCDEFRTTDG RKKAAAIMFD KRIFHLIVIG GDGSLMGAQK 120
  121 LKEEWGRFGE ELFAEGKITE EVANEGRELH LAGIVGSIDN DCIESDKSIG SDTALHRICE 180
  181 AIDGLVMTAQ SHQRVFVVEV MGRHCGYLAL TAAIAVEADY VFYPEIPPDE KWPEQLCHQL 240
  241 GSVRKMGKRQ NVIILGEGVT NSKGQRIDVR QVKEEIETRL QLEVRIATLG HLQRGGAPSF 300
  301 LDRLIGLRMG YEAVQEVLKG KEEKEGAVVT GQKTIAKVMC LRGHNIQRNE LSRVIRQTE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 108.0
Match: 6pfkA
Description: ATP-dependent phosphofructokinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
6-phosphofructokinase activity 12.7403693686468 bayes_pls_golite062009
phosphofructokinase activity 11.7059647240147 bayes_pls_golite062009
fructose-6-phosphate binding 9.55959144901554 bayes_pls_golite062009
fructose binding 9.55841643584799 bayes_pls_golite062009
carbohydrate kinase activity 9.54757838113048 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 3.19280659830412 bayes_pls_golite062009
kinase activity 2.85624705588769 bayes_pls_golite062009
fructose-2,6-bisphosphate 2-phosphatase activity 2.7198911999025 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 2.67472251964197 bayes_pls_golite062009
sugar binding 2.21212411210899 bayes_pls_golite062009
monosaccharide binding 2.05358532613083 bayes_pls_golite062009
transferase activity 1.97789134877808 bayes_pls_golite062009
catalytic activity 1.89212073381079 bayes_pls_golite062009
protein binding 1.76136621968843 bayes_pls_golite062009
binding 1.57437723650762 bayes_pls_golite062009
carbohydrate binding 0.97067862054315 bayes_pls_golite062009
hydrolase activity 0.276140444059183 bayes_pls_golite062009
cytoskeletal protein binding 0.184982121995695 bayes_pls_golite062009
tubulin binding 0.0889554716245424 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [360-756]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TANEEIMQRH SDLACRLRGF GFLDKQTYLN FVSIPLSTTM PSRTKTFAVV HIGSPCAGMN  60
   61 AATYSFTRMA NHSGIQVIGI KHGWDGLKNK DVKLLTWANV QGWAQFGGSM LGTKRQLPSE 120
  121 MDLIAEGLNS NNVDGLVIIG GFMAFESALI LQQNRSEYTC LSIPIVVIPA TISNNCPGTC 180
  181 MSLGVDTALN EICRQVDNIS QNAIGSKNKV MIIETMGSRS GFLATMTALS TGSQFALIRQ 240
  241 VETNEKDLEK LAIETKERLD SGNLEKFLLI RSEGASDEIY SPDVKKIFDK VMKNKYGVRI 300
  301 TNLGYSQLGG HPSCFDRQMG IRMGVRAFEG IVNPVKMGDR DCCVIGLRGS SLRYVPVQGL 360
  361 GKKVCFEHGV PHNMWWLDLH PLVEAMTKKP QEAVLSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.045757
Match: 2higA
Description: No description for 2higA was found.

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