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View Structure Prediction Details

Protein: CE05287
Organism: Caenorhabditis elegans
Length: 428 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05287.

Description E-value Query
Range
Subject
Range
gi|134024818, gi... - gi|76657550|ref|XP_596391.2| PREDICTED: similar to pregnancy-associated glycoprotein-16 [Bos taurus]...
345.0 [0..1] [428..1]

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Predicted Domain #1
Region A:
Residues: [1-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTFIALLAL LTVVSAEVHQ FNIGYRPNMR QRMNAKGKLA EYEKERNELL SKKSLQLASS  60
   61 SSPVIDYEDM AYMVQISLGS PAQNFVLFID SGSSNLWVPD ITCAGGKDAT CGSYCKSTPY 120
  121 DACLTFCQEE CCTKTVEGVK VLSTTDACQS KHRFNSSLSS SYVTNGQKFD MTYNTGEVKG 180
  181 FFGVDTFCFT NTSVCATGQV FGQATTIGEA FAKQPEDGII GLGWPALAVN QQTPPLFNLM 240
  241 NQGKLDQPYF VVYLANIGPT SQINGGAFTV GGLDTTHCSS NVDWVPLSTQ TFWQFKLGGV 300
  301 SSGSYSQAPN SGWQAAADTA ASFIGAPKSV VTSLAKAVGA TYVPLTGAFF MDCDAVVPDI 360
  361 VFTINGKTYN MPSTSFVVSA GPGPCMFAFY ELTAGGFYPA WMLGPPFMRA YCHVHDMKSG 420
  421 RLGLAKVL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.522879
Match: 2psgA
Description: REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
aspartic-type endopeptidase activity 7.9145950161796 bayes_pls_golite062009
aspartic-type peptidase activity 7.9145950161796 bayes_pls_golite062009
peptidase activity 5.78181196721293 bayes_pls_golite062009
endopeptidase activity 5.4888481808613 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 5.39972232367526 bayes_pls_golite062009
hydrolase activity 4.34796304893506 bayes_pls_golite062009
catalytic activity 1.54514410489082 bayes_pls_golite062009
binding 1.10054369202721 bayes_pls_golite062009
receptor binding 0.561225023505917 bayes_pls_golite062009
protein binding 0.193907750061394 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle