| Protein: | CE04479 |
| Organism: | Caenorhabditis elegans |
| Length: | 374 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04479.
| Description | E-value | Query Range |
Subject Range |
|
|
190.0 | [0..2] | [372..696] |
|
Region A: Residues: [1-104] |
1 11 21 31 41 51
| | | | | |
1 MAKKSSGSAP SRASGRSGKQ TTHFQVVHDA TKHRAKRSKS SKSGDSKSSS QDASVKKILD 60
61 HKLFNTHYVE YNVLLSNGRK MMATEFDFEG KKEQKLLADY KYKI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [105-173] |
1 11 21 31 41 51
| | | | | |
1 TNQDDDPDED FAVEKIIAHR FSGKKNKPLF LVMWRGYPNP VSHSEMWENE LSNCKDLLEA 60
61 YKDSHDMKP
|
| Detection Method: | |
| Confidence: | 3.81 |
| Match: | 1g6zA |
| Description: | Histone methyltransferase clr4, chromo domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.268337333010953 | bayes_pls_golite062009 |
|
Region A: Residues: [174-374] |
1 11 21 31 41 51
| | | | | |
1 PPVKKSNKKK GSKKSPKKSA KSKDDDSSDE EEEEEVKEKS PKKSSKSTKR AASDDDEEEE 60
61 PVATKKSKKS KRAETPEEED DEEEEVVKTP KKTKKSKRAE TPEEEDEVEE EVVKTPKKSK 120
121 SSKSPKKSKR AETSDEEDED EEDEKEAPKS SKKQEKAKSS KRVAEDSGNE EEDQDNTSGS 180
181 GSEGEEEEEE ASSNGKRKSR H
|
| Detection Method: | |
| Confidence: | 3.30103 |
| Match: | 1w9rA |
| Description: | Solution Structure of Choline Binding Protein A, Domain R2, the Major Adhesin of Streptococcus pneumoniae |
Matching Structure (courtesy of the PDB): |
|
