| Protein: | egl-43 |
| Organism: | Caenorhabditis elegans |
| Length: | 543 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-43.
| Description | E-value | Query Range |
Subject Range |
|
|
695.0 | [0..14] | [529..2381] |
|
Region A: Residues: [1-243] |
1 11 21 31 41 51
| | | | | |
1 MSIDTDFLTS VEVKEDELHG NVLIAVTQIA LGRTIGVIDK ATPNDSNALL ILNLIKEADD 60
61 GEDANICMRQ EDRKTFLQTS KIINIGERLL LQRLSEEECD EEDQDDLENL ILLKDEDRPD 120
121 STQSCTKSSS EDSNLNGFEE YIREHGELVP GQTPPDGSHK CGVCPKSFSS ASGLKQHSHI 180
181 HCSLKPFRCH LCPKSYTQFS NLCRHRRVHS DGWTCPTCQS QMPSQAALTK HRPVCEMTAL 240
241 YKP
|
| Detection Method: |  |
| Confidence: | 18.69897 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.14649486810497 | bayes_pls_golite062009 |
| DNA binding | 2.89992872665011 | bayes_pls_golite062009 |
| nucleic acid binding | 2.66588130528088 | bayes_pls_golite062009 |
| transcription factor activity | 1.97913234583912 | bayes_pls_golite062009 |
| binding | 1.7678140110688 | bayes_pls_golite062009 |
| catalytic activity | 0.616333600617445 | bayes_pls_golite062009 |
| transcription activator activity | 0.35578487491271 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.29294316958168 | bayes_pls_golite062009 |
| protein binding | 0.286371122239253 | bayes_pls_golite062009 |
|
Region A: Residues: [244-300] |
1 11 21 31 41 51
| | | | | |
1 LMAQLAGLSG AGGLGSVPYW PHILQMATQA PHFPLAFLAA NPEAYKLMQQ TTCASPD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [301-543] |
1 11 21 31 41 51
| | | | | |
1 AECSSGHASE SSPTTTEPVD LTATPKPPST SEMETTSKSD DGEDRDSIGD SGNDDDDDSE 60
61 AGVLDESSTT TSTKKRPTSH TISDILAAPQ LGAQALNSTF LGMLQRSLNY NPAVPSPHSF 120
121 LRAMSGAKAS SSPSSSSGSG KDRYTCKFCQ KVFPRSANLT RHLRTHTGEQ PYKCQYCERS 180
181 FSISSNLQRH VRNIHNKPNT SLTPHNHHRQ RSLHNSTSTS TTTTTVHHPL LHLPGTSVPV 240
241 PKV
|
| Detection Method: | |
| Confidence: | 57.045757 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
