| Protein: | mig-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 672 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mig-5.
| Description | E-value | Query Range |
Subject Range |
|
|
348.0 | [0..1] | [622..1] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MEPPCTSDCS QIKVFYYLDD ETTPYVSVIE AREGVATLGN FKNSFTKRGY KYYAKELDPD 60
61 IQREVKVELT TDSDRL
|
| Detection Method: |  |
| Confidence: | 7.09691 |
| Match: | 1wspA |
| Description: | Crystal structure of axin dix domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [77-222] |
1 11 21 31 41 51
| | | | | |
1 RKSQNGFYEI FLVSTPGYGT LPRNSGTMTR PQRTALDKRR RRSADFDATP YSDASLAPST 60
61 IVSRRAGEHL AELYTSNSED PYQYDEHTRR TGDDSSLYEP LAARDMNKIY DDDRRRKKQK 120
121 KERFRRPYVP STISSATESS VNSGLP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [223-345] |
1 11 21 31 41 51
| | | | | |
1 RILEIYLPMK NVPYLGLSVC TIDGHIFVSE IAPEGAVEKD GRVNVGDQIL QVNRVSFEEL 60
61 SGPQAVRSLR EAASSKRPIT LYISKFARGA PSEYDDPLAS MASETMPLDV GVWVETAVQN 120
121 TEK
|
| Detection Method: | |
| Confidence: | 6.221849 |
| Match: | 1lcyA |
| Description: | Mitochondrial serine protease HtrA2; Mitochondrial serine protease HtrA2, catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.72140630069624 | bayes_pls_golite062009 |
| protein binding | 1.54045195100026 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.29313596416074 | bayes_pls_golite062009 |
|
Region A: Residues: [346-405] |
1 11 21 31 41 51
| | | | | |
1 MKALGLDPQE QTATTIDDGT LPFTSTASDD EERMLYDQRR NGIPRALIEE AERKRENEQN 60
61
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [406-510] |
1 11 21 31 41 51
| | | | | |
1 EKIEQLTEMI DPIIVVRSMA RPDSGLAVKN RKWLKILVPM SFIGRDLVDW LVDHMADIHN 60
61 RKKARIYAAR LLAAGLIRHV VSKLTFTEKC YYVFGDGILG NDRNS
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 1fshA |
| Description: | Segment polarity protein Dishevelled-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.04426015975991 | bayes_pls_golite062009 |
| binding | 1.99063774159045 | bayes_pls_golite062009 |
| DNA binding | 1.63968725174405 | bayes_pls_golite062009 |
| nucleic acid binding | 1.51035375793093 | bayes_pls_golite062009 |
| transcription factor activity | 1.16072080355661 | bayes_pls_golite062009 |
| transcription activator activity | 0.14130464856269 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.13573040816325 | bayes_pls_golite062009 |
|
Region A: Residues: [511-672] |
1 11 21 31 41 51
| | | | | |
1 TDTTGTSGTT MRVEATTEVT YVGSPAPHAL AARVGRNIPH RLETTTLSPV AHDQTWLRRR 60
61 RDCESPMTND YASMVGESQI GMNPVGNYHV FGTKNNHRQV PAPSQVTSSS LTNGSGGLGG 120
121 PPPTPLSSTM VLAASPIQSQ NAVNHDFDGE NSSNSRTRIL RT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
