YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE02116
Organism: Caenorhabditis elegans
Length: 364 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02116.

Description E-value Query
Range
Subject
Range
gi|91084329 - gi|91084329|ref|XP_972528.1| PREDICTED: similar to Serine/threonine-protein phosphatase alpha-1 isof...
360.0 [0..33] [357..8490]

Back

Predicted Domain #1
Region A:
Residues: [1-364]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTDGNNNKK GSKEGPKSSE ISKFDLAKEN PKLAEWMDDC IKRMNSLYKD TNINICNVMT  60
   61 GHEIISIIRM VEAIFMEESN LCEAEAPIKV IGDIHAQYQD MNRLFDLIGR VPEEKLMFLG 120
  121 DYVDRGPQGI EVLILLFCLK IRYRDRIYLL RGNHETPSVN KIYGFYVECQ YKYGIGLWWD 180
  181 FQSCFNRMPM SGLISKRVLC MHGGLSPELI NLDTIRNIPR PCEPLDRGLL IDLLWSDPTN 240
  241 KGEGWFHSIR GISYMFGKGV VEQACKSLEI DLIIRAHQVV QDGYEMMTGR RLITVFSVPN 300
  301 YCAQFTNAAA VVCLNANLQI SFQQMIPPPL PEGTKAKAAP AIAIDPNIDA ARADKDAIKP 360
  361 FVKE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.09691
Match: 1fjmA
Description: Protein phosphatase-1 (PP-1)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 11.6417995308386 bayes_pls_golite062009
protein serine/threonine phosphatase activity 10.6440947462013 bayes_pls_golite062009
phosphatase activity 10.5525832502704 bayes_pls_golite062009
phosphoric ester hydrolase activity 10.3702645338723 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 9.02791306892273 bayes_pls_golite062009
calcium-dependent protein serine/threonine phosphatase activity 6.04386346716682 bayes_pls_golite062009
myosin phosphatase activity 5.31703100176823 bayes_pls_golite062009
hydrolase activity 3.13006743434485 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.68552051869632 bayes_pls_golite062009
kinase activity 1.67788383575784 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.57807175808088 bayes_pls_golite062009
protein kinase activity 1.4514460578232 bayes_pls_golite062009
binding 1.44538582463569 bayes_pls_golite062009
catalytic activity 1.39852585255405 bayes_pls_golite062009
transferase activity 1.3407391509244 bayes_pls_golite062009
protein binding 1.33435965029646 bayes_pls_golite062009
transporter activity 1.24767072239634 bayes_pls_golite062009
molecular transducer activity 1.08090214431427 bayes_pls_golite062009
signal transducer activity 1.08090214431427 bayes_pls_golite062009
calmodulin binding 0.77173071932406 bayes_pls_golite062009
protein serine/threonine kinase activity 0.66803085638835 bayes_pls_golite062009
substrate-specific transporter activity 0.528189469950839 bayes_pls_golite062009
structural molecule activity 0.364610105488011 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle