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View Structure Prediction Details

Protein: CE02009
Organism: Caenorhabditis elegans
Length: 470 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02009.

Description E-value Query
Range
Subject
Range
gi|157751748 - gi|157751748|ref|XP_001679586.1| Hypothetical protein CBG02639 [Caenorhabditis briggsae AF16]
gi|187037245, gi... - gi|39597077|emb|CAE59304.1| Hypothetical protein CBG02639 [Caenorhabditis briggsae], gi|187037245|em...
429.0 [0..4] [470..1]

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Predicted Domain #1
Region A:
Residues: [1-470]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLSILFIF VSSYSFCLAA PATDKVNDLP GLTFTPDFFH YSGYLRAWTD KYLHYWLTES  60
   61 SRAPTQDPLV LWLNGGPGCS SLDGLIEELG PFHVKDFGNS IYYNEYAWNK FANVLFLESP 120
  121 AGVGYSYSTN FNLTVSDDEV SLHNYMALLD FLSKFPEYKG RDFWITGESY AGVYIPTLAV 180
  181 RILNDKKNFP NFKGVAIGNG ALNFPNNYNT MVPFYYYHAL VRDDLYNDIA RNCCNNNIGT 240
  241 CDIYSKFFDP NCRDKVINAL DGTNELNMYN LYDVCYYNPT TNLKKAFIER QMRIAVGLPA 300
  301 RKHNAATTVP LCAQTNNTHV YLNRADVRKS LHIPSSLPAW EECSDQVGKN YVVTHFNVIP 360
  361 EFQTMIAAGI KILVYNGDVD TACNSIMNQQ FLTSLNLTVL GEQEKVNEAW HYSGQTGTAV 420
  421 AGFQTKFAGN VDFLTVRGSG HFVPEDKPKE SQQMIFNFIN NKDYSTPIQL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 115.0
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 4.09944423676394 bayes_pls_golite062009
peptidase activity 2.49064988313037 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 2.11440496336538 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.10044305272656 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.46950384675756 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.815337671271829 bayes_pls_golite062009
endopeptidase activity 0.43631945855397 bayes_pls_golite062009
binding 0.351031277062254 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle