| Protein: | daf-7 |
| Organism: | Caenorhabditis elegans |
| Length: | 350 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for daf-7.
| Description | E-value | Query Range |
Subject Range |
|
|
258.0 | [0..2] | [350..3] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MFMASSLPVF IFLLSLPHGL TFNCTNSGVC IEKMKQHRTE YLKNEILDQL NMKEAPKGLK 60
61 PMDPEMKSVY LEMYRDLLEK DEQDMGVEMS FYTAKDP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [98-225] |
1 11 21 31 41 51
| | | | | |
1 SYGENPSQLV AKFDVTNDLE RSDILQATLT VSIEIPAKDS GMLQDVQVQV YEKNEDGSMG 60
61 EMVTSGIFAT KGSERISIQL PIDTVKSWFT ISPIQGIFVK AMLDGRNVAL HPQQTTADVD 120
121 NMRLQLST
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [226-350] |
1 11 21 31 41 51
| | | | | |
1 RPKGSRKRRS HAKPVCNAEA QSKGCCLYDL EIEFEKIGWD WIVAPPRYNA YMCRGDCHYN 60
61 AHHFNLAETG HSKIMRAAHK VSNPEIGYCC HPTEYDYIKL IYVNRDGRVS IANVNGMIAK 120
121 KCGCS
|
| Detection Method: | |
| Confidence: | 37.30103 |
| Match: | 1bmpA |
| Description: | BONE MORPHOGENETIC PROTEIN-7 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| type II transforming growth factor beta receptor binding | 8.13965462870591 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 1 binding | 7.85857332663967 | bayes_pls_golite062009 |
| platelet-derived growth factor receptor binding | 6.4684557744685 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor binding | 5.9885816311386 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 2 binding | 5.13799972612867 | bayes_pls_golite062009 |
| receptor serine/threonine kinase binding | 4.8369569327215 | bayes_pls_golite062009 |
| cytokine activity | 4.8098396386842 | bayes_pls_golite062009 |
| growth factor activity | 4.74498867224238 | bayes_pls_golite062009 |
| receptor binding | 4.70889547404918 | bayes_pls_golite062009 |
| transmembrane receptor protein serine/threonine kinase binding | 4.69128752159226 | bayes_pls_golite062009 |
| transforming growth factor beta receptor binding | 4.69128752159226 | bayes_pls_golite062009 |
| protein binding | 3.41839891062651 | bayes_pls_golite062009 |
| fibronectin binding | 3.36540670741416 | bayes_pls_golite062009 |
| binding | 3.28090754728074 | bayes_pls_golite062009 |
| growth factor binding | 3.23153419905493 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 3.12262133458315 | bayes_pls_golite062009 |
| cell surface binding | 2.9725198156666 | bayes_pls_golite062009 |
| heparin binding | 2.81661725670177 | bayes_pls_golite062009 |
| glial cell line-derived neurotrophic factor receptor binding | 2.42595321135263 | bayes_pls_golite062009 |
| polysaccharide binding | 2.42568523771453 | bayes_pls_golite062009 |
| transcription regulator activity | 2.31616116370197 | bayes_pls_golite062009 |
| hormone activity | 2.10500409590202 | bayes_pls_golite062009 |
| platelet-derived growth factor binding | 2.01091405432331 | bayes_pls_golite062009 |
| protein dimerization activity | 1.82426827198541 | bayes_pls_golite062009 |
| transcription repressor activity | 1.69276038320301 | bayes_pls_golite062009 |
| transcription activator activity | 1.63851701049695 | bayes_pls_golite062009 |
| collagen binding | 1.56562537405529 | bayes_pls_golite062009 |
| protein kinase activity | 1.41847295970293 | bayes_pls_golite062009 |
| molecular transducer activity | 1.40678896068326 | bayes_pls_golite062009 |
| signal transducer activity | 1.40678896068326 | bayes_pls_golite062009 |
| protein homodimerization activity | 1.377005150119 | bayes_pls_golite062009 |
| protein heterodimerization activity | 1.19300119957916 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.19169017348435 | bayes_pls_golite062009 |
| identical protein binding | 1.18858126900765 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.1841101716474 | bayes_pls_golite062009 |
| kinase activity | 1.15484804727089 | bayes_pls_golite062009 |
| cytokine binding | 1.11655568277071 | bayes_pls_golite062009 |
| morphogen activity | 0.91146826241391 | bayes_pls_golite062009 |
| pattern binding | 0.90497366619649 | bayes_pls_golite062009 |
| neurotrophin receptor binding | 0.81172494974121 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 3 binding | 0.772832351269279 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.675252100191059 | bayes_pls_golite062009 |
| neurotrophin TRK receptor binding | 0.552075777293301 | bayes_pls_golite062009 |
| neurotrophin TRKB receptor binding | 0.552075777293301 | bayes_pls_golite062009 |
| transforming growth factor beta binding | 0.539891088283499 | bayes_pls_golite062009 |
| beta-amyloid binding | 0.51409569546989 | bayes_pls_golite062009 |
| SMAD binding | 0.195453215953383 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.1719107348851 | bayes_pls_golite062009 |
| follicle-stimulating hormone activity | 0.126261994098681 | bayes_pls_golite062009 |
| catalytic activity | 0.105223830172599 | bayes_pls_golite062009 |
| carbohydrate binding | 0.0235054088545197 | bayes_pls_golite062009 |
