| Protein: | nuo-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 436 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nuo-4.
| Description | E-value | Query Range |
Subject Range |
|
|
429.0 | [0..1] | [436..1] |
|
Region A: Residues: [1-311] |
1 11 21 31 41 51
| | | | | |
1 MPGSMSKLGG LATGLLACSR SGALSNQVRG VVHKSLLRLP SEHPEPWDYK HNGFNYIDGL 60
61 KDDTRSHFHQ NSKLIVVEGN IGSGKTTLAK QLADQLGFVH FPEFRMDDIL VDRYGNDLRN 120
121 YYNKFPARYR LPDISMFYKN PSGELSAAMQ DRIFNCRFDQ YLNALAHILN TGQGVVLERT 180
181 PHSDFVFANA MRDKNYIGHE YFKHYYFVRK NALPQLHFWP HLVVYLNTPT NKCLENIKRR 240
241 GNTDEIATVD ERYLKTIEES YKDSLREYRN HSKILAYDWT KPGDTDAVVE DIERLDLDFF 300
301 EWHSGDVMEE W
|
| Detection Method: |  |
| Confidence: | 39.154902 |
| Match: | 4tmkA |
| Description: | Thymidylate kinase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 3.59240819084968 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 3.32597131015894 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.27130158388246 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 3.20563367652813 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.1945674591238 | bayes_pls_golite062009 |
| oxidoreductase activity | 3.16363151312976 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 3.06875573889397 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 2.97411320405542 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.90050421101998 | bayes_pls_golite062009 |
| binding | 2.01755875920323 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.53142082854758 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.52938239070386 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.52887308780164 | bayes_pls_golite062009 |
| nucleotide binding | 1.52746968836881 | bayes_pls_golite062009 |
| ATP binding | 1.23942044024113 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 1.21044170258803 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 1.19481945569892 | bayes_pls_golite062009 |
| electron carrier activity | 1.01221075506867 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| kinase activity | 0.641541011250583 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.546796591575762 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.543610140926125 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.540750418412449 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.517457589081898 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.40876498215632 | bayes_pls_golite062009 |
| 4 iron, 4 sulfur cluster binding | 0.160596246929241 | bayes_pls_golite062009 |
| protein binding | 0.071010918255742 | bayes_pls_golite062009 |
| protein kinase activity | 0.0646123847220056 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0636334376764289 | bayes_pls_golite062009 |
| hydrolase activity | 0.0340518447528398 | bayes_pls_golite062009 |
|
Region A: Residues: [312-436] |
1 11 21 31 41 51
| | | | | |
1 NTIVDSVGWN GWRQYVTNKY DARMLAFDGI PKHEVGELYT NPRDTGHFLH VMRKEVLKSP 60
61 YGYGYIAKNG DHQAGLNAWH TGHHLPEPWY EYYFREAYYD DLTSHETSLD LDSDSYDPDY 120
121 VHHHH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
