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View Structure Prediction Details

Protein: CE01273
Organism: Caenorhabditis elegans
Length: 574 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01273.

Description E-value Query
Range
Subject
Range
gi|187028935, gi... - gi|39582329|emb|CAE67578.1| Hypothetical protein CBG13109 [Caenorhabditis briggsae], gi|187028935|em...
439.0 [0..1] [574..1]

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Predicted Domain #1
Region A:
Residues: [1-574]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCRTLLGVAF LVVTVLSQGE KDLIQNLPGL LFKANFKSYS GYVDANANGT WKMHYMLTES  60
   61 RSNPDTDPLL VWFNGGPGCS SLGGLFEELG PFYVNFDGQT LYENPYAWNA KANVLYLESP 120
  121 IGVGYSYDTT TPGYFQANDD QSAAQNYQAL TNFFNVAQPK YTNRTFYLSG ESYAGIYIPM 180
  181 LTDLIVQGIN NPNQPFPNKN FQGSAIGNGF MNVAGLLNAL TLWSAYHGRV SEQNWADIKA 240
  241 NCSKGADVDS FDFSQFTTSQ NKIDYVGDGS YCGNLIQPLI SQNALGNEGF DQYNFYQECY 300
  301 DKSVFQAPPP AGGKRHKRSA MQGVSSVQKN LQYQQLGNFQ GTSNLAKNTA TLVNRFSNDN 360
  361 QFGYFCWNED AVSKYLNSDN VQNALNIPQA WKDQKNTWED CRMSIYNNYT LKYNTTNRFF 420
  421 NNIITNLTTD FRFLIYNGDV DTVCNYLGDA KHILQVAKDN GLTSGPRTPW YYSNNQQLAG 480
  481 YVQTYSGKNK NNAMITIDLL TVKGAGHMVP YDRAGPSVQM ISNFVWAPKN VVINYTSQDN 540
  541 FNPNIQLSDL VDSGSSSTVA FFISMFAVLL NIVF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 112.0
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 4.09944423676394 bayes_pls_golite062009
peptidase activity 2.49064988313037 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.10044305272656 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.83678475999803 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.46950384675756 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.815337671271829 bayes_pls_golite062009
thiolester hydrolase activity 0.49805374409569 bayes_pls_golite062009
endopeptidase activity 0.35106325845064 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle