| Protein: | tbx-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 423 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tbx-2.
| Description | E-value | Query Range |
Subject Range |
|
|
340.0 | [0..33] | [423..355] |
|
Region A: Residues: [1-252] |
1 11 21 31 41 51
| | | | | |
1 MAFNPFALGR PDLLLPFMGA GVGGPGAGGP PPNLFFSMLQ AGFPPGPVGS PPEDDGVTDD 60
61 PKVELDEREL WQQFSQCGTE MVITKSGRRI FPAYRVKISG LDKKSQYFVM MDLVPADEHR 120
121 YKFNNSRWMI AGKADPEMPK TLYIHPDSPS TGEHWMSKGA NFHKLKLTNN ISDKHGYTIL 180
181 NSMHKYQPRL HVVRCADRHN LMYSTFRTFV FRETEFIAVT AYQNEKVTEL KIENNPFAKG 240
241 FRDAGAGKRE KK
|
| Detection Method: |  |
| Confidence: | 88.522879 |
| Match: | 1h6fA |
| Description: | T-box protein 3, tbx3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.29102864831653 | bayes_pls_golite062009 |
| transcription regulator activity | 1.92025295308511 | bayes_pls_golite062009 |
| DNA binding | 1.86143461884692 | bayes_pls_golite062009 |
| nucleic acid binding | 1.68075928646599 | bayes_pls_golite062009 |
| transcription factor activity | 1.33446362838411 | bayes_pls_golite062009 |
| protein binding | 0.74749676675118 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.47331695689559 | bayes_pls_golite062009 |
| transcription activator activity | 0.33290695293257 | bayes_pls_golite062009 |
| DNA strand annealing activity | 0.0812057721813604 | bayes_pls_golite062009 |
|
Region A: Residues: [253-423] |
1 11 21 31 41 51
| | | | | |
1 RQLHRMNGDA TQSPPGKTAS LPTHSPHPSE SNSEDDEPTL KKCKPEPSQT PTTSSLSTST 60
61 TPTLSAHHPL RSPQFCIPPP IDMMYQNMPM DLLAHWQMAT LFPQFSMALN SPAAAASLLS 120
121 KHLAKASSEC KVEATSEDSE EAEKPEVKKE QKSVTPPKKG GFDVLDLLSK P
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
