| Protein: | SPCC1020.13c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 669 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC1020.13c.
| Description | E-value | Query Range |
Subject Range |
|
|
608.0 | [0..1] | [667..259] |
|
|
554.0 | [0..23] | [659..273] |
|
|
550.0 | [0..66] | [659..362] |
|
|
524.0 | [0..1] | [643..84] |
|
|
518.0 | [0..5] | [657..166] |
|
|
518.0 | [0..5] | [655..147] |
|
|
518.0 | [0..5] | [657..160] |
|
|
517.0 | [0..5] | [657..159] |
|
|
516.0 | [0..5] | [656..147] |
|
|
515.0 | [0..5] | [657..164] |
|
Region A: Residues: [1-137] |
1 11 21 31 41 51
| | | | | |
1 MQESSQEEPV HYVQWFYLSN YDLYDETSSM ELTGAQSWRR FLNYDNNALE AKYNEIITEE 60
61 VSQEPNQKNV IVGISGLHVV NLPTLTLKPL YWPSASKNDT LRVVRGLWMY EDTGLPVINE 120
121 LSDMLEEGYQ EVKPYAV
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.539 | N/A | N/A | a.79.1 | Antitermination factor NusB |
| View | Download | 0.525 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.521 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.515 | N/A | N/A | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.483 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.481 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.439 | N/A | N/A | b.18.1 | Galactose-binding domain-like |
| View | Download | 0.348 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.341 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.338 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.319 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.292 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.285 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.272 | N/A | N/A | d.110.4 | SNARE-like |
|
Region A: Residues: [138-235] |
1 11 21 31 41 51
| | | | | |
1 NWDNVLKEEE EGKDSQDDPS VLSHKRNKSS KELIDAMQWP LKPTSSGKYV FYEDGYRALI 60
61 CQGGLLSYFS KGTQSRRTSI KGMPVVRDFP YFEDDGFN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [236-300] |
1 11 21 31 41 51
| | | | | |
1 GPKQVTDLFL VVHGIGQKRS ETEERFLFTK TCNVFRSLIQ IQKNIMKEDP LIRNDYEPQL 60
61 LPICW
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [301-433] |
1 11 21 31 41 51
| | | | | |
1 RNKLNFNSYI KPVAGDEGRV EDEEFEENRF SIEDIEIDSI PAVRRLLGDV MSDIPYYMSH 60
61 HKESIIKSVI REANRVYHLW KDCNPYFLEN KGRIFIIGHS LGSTVVFDIL SLQPTFVKEI 120
121 TIDDDESCFI FDT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.595 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.529 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.510 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.476 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.417 | N/A | N/A | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.393 | N/A | N/A | a.278.1 | Description not found. |
| View | Download | 0.372 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.355 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.306 | N/A | N/A | d.58.16 | Poly(A) polymerase, C-terminal domain |
| View | Download | 0.269 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
|
Region A: Residues: [434-669] |
1 11 21 31 41 51
| | | | | |
1 NGFFCFGGPV GFFLHLNQQS IIPRRGRGSS RYEINKNFIN SDVPKSYTYD GYDRYGCLAV 60
61 DSFYNIYNHL DPVAMRLNPT VDLSFSKGIH PTRILFTRKS SSILRMISHS NTDPVELRSY 120
121 NQSLQQNKNN EPTAVVPLEP EQTVELETRN FRREERAKWR MQELNENSQL DYVFTSAHGV 180
181 ISNKYLSMLS AHSSYWSSED LACFLVVETG RNFGIANSIE QFRGKHMPRI FKGDSS
|
| Detection Method: | |
| Confidence: | 76.744727 |
| Match: | PF02862.8 |
| Description: | No description for PF02862.8 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
