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Protein Overview: SPCC1020.13c

General Information:
Name(s) found: SPCC1020.13c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • phospholipase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 669 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: cellular lipid catabolic process [IC]
    Molecular Function: metal ion binding [IEA]
    phospholipase activity [NASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQESSQEEPV HYVQWFYLSN YDLYDETSSM ELTGAQSWRR FLNYDNNALE AKYNEIITEE  60
   61 VSQEPNQKNV IVGISGLHVV NLPTLTLKPL YWPSASKNDT LRVVRGLWMY EDTGLPVINE 120
  121 LSDMLEEGYQ EVKPYAVNWD NVLKEEEEGK DSQDDPSVLS HKRNKSSKEL IDAMQWPLKP 180
  181 TSSGKYVFYE DGYRALICQG GLLSYFSKGT QSRRTSIKGM PVVRDFPYFE DDGFNGPKQV 240
  241 TDLFLVVHGI GQKRSETEER FLFTKTCNVF RSLIQIQKNI MKEDPLIRND YEPQLLPICW 300
  301 RNKLNFNSYI KPVAGDEGRV EDEEFEENRF SIEDIEIDSI PAVRRLLGDV MSDIPYYMSH 360
  361 HKESIIKSVI REANRVYHLW KDCNPYFLEN KGRIFIIGHS LGSTVVFDIL SLQPTFVKEI 420
  421 TIDDDESCFI FDTNGFFCFG GPVGFFLHLN QQSIIPRRGR GSSRYEINKN FINSDVPKSY 480
  481 TYDGYDRYGC LAVDSFYNIY NHLDPVAMRL NPTVDLSFSK GIHPTRILFT RKSSSILRMI 540
  541 SHSNTDPVEL RSYNQSLQQN KNNEPTAVVP LEPEQTVELE TRNFRREERA KWRMQELNEN 600
  601 SQLDYVFTSA HGVISNKYLS MLSAHSSYWS SEDLACFLVV ETGRNFGIAN SIEQFRGKHM 660
  661 PRIFKGDSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..137] MSA 3.054987 View MSA. No confident structure predictions are available.
    2 View Details [138..235] deduced N/A No confident structure predictions are available.
    3 View Details [236..300] MSA 2.084992 View MSA. No confident structure predictions are available.
    4 View Details [301..433] MSA 1.087987 View MSA. No confident structure predictions are available.
    5 View Details [434..669] Pfam 76.744727 No description for PF02862.8 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle