YRC Public Data Repository - Protein Structure Prediction

Protein:	SPCC825.04c
Organism:	Schizosaccharomyces pombe
Length:	204 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC825.04c.

Description	E-value	Query Range	Subject Range
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	127.0	[0..36]	[197..1]
gi\|167039151, gi... - gi\|167039151\|ref\|YP_001662136.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp.... gi\|76797381, gi\|... - gi\|76797381\|ref\|ZP_00779704.1\| Ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter ethan... gi\|241884906, gi... - gi\|241902652\|ref\|ZP_04787384.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter broc... gi\|242230040, gi... - gi\|242258437\|ref\|ZP_04803241.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp. ...	122.0	[0..38]	[197..2]
gi\|77963034, gi\|... - gi\|77963034\|ref\|ZP_00826848.1\| COG0454: Histone acetyltransferase HPA2 and related acetyltransferase...	119.0	[0..36]	[200..1]
gi\|219992356, gi... - gi\|89210568\|ref\|ZP_01188956.1\| Ribosomal-protein-alanine acetyltransferase [Halothermothrix orenii H...	118.0	[0..39]	[202..3]
gi\|77810723, gi\|... - gi\|77814221\|ref\|ZP_00813484.1\| GCN5-related N-acetyltransferase [Shewanella putrefaciens CN-32], gi\|...	118.0	[0..39]	[196..3]
gi\|116221091, gi... - gi\|75820434\|ref\|ZP_00750481.1\| COG0454: Histone acetyltransferase HPA2 and related acetyltransferase...	118.0	[0..39]	[196..3]
gi\|149750750, gi... - gi\|153835996\|ref\|ZP_01988663.1\| acetyltransferase, gnat family [Vibrio parahaemolyticus AQ3810], gi\|... gi\|28901342, gi\|... - gi\|28901342\|ref\|NP_800997.1\| putative acetyltransferase [Vibrio parahaemolyticus RIMD 2210633], gi\|2... gi\|28809889 - gi\|28809889\|dbj\|BAC62830.1\| putative acetyltransferase [Vibrio parahaemolyticus RIMD 2210633]	117.0	[0..38]	[202..2]
gi\|78042699, gi\|... - gi\|78042699\|ref\|YP_359365.1\| acetyltransferase [Carboxydothermus hydrogenoformans Z-2901], gi\|779948...	117.0	[0..30]	[199..2]
gi\|229519834, gi... - gi\|229519834\|ref\|ZP_04409269.1\| acetyltransferase [Vibrio cholerae TM 11079-80], gi\|229519831\|ref\|ZP... gi\|75823152, gi\|... - gi\|75823152\|ref\|ZP_00752677.1\| COG0454: Histone acetyltransferase HPA2 and related acetyltransferase... gi\|153827071, gi... - gi\|153827071\|ref\|ZP_01979738.1\| acetyltransferase, gnat family [Vibrio cholerae MZO-2], gi\|149739042... tr\|D7HD20\|D7HD20... - Acetyltransferase OS=Vibrio cholerae RC385 GN=VCRC385_03232 PE=4 SV=1	117.0	[0..39]	[196..3]

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Predicted Domain #1

Region A:
Residues: [1-204]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFLKQYLFY SPRRMKTQEI KNVTLEDVDF LKNLGVWVEI YHHLEKGLLQ QCFNLVKKNM  60
   61 EALYRQSSFG WDDSEKLKEM EMEKLEYICI FEKTSKKLVG FLSFEDTVEA GLTCLYIYEI 120
  121 QLDEHIRGRN VGKWLLKNAS ILAYRRNLKY IFLTVFSANL NALNFYHHFD FVPHESSPQE 180
  181 KKFRSGKVIH PDYYILYTKS RKDW

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	24.30103
Match:	1yr0A
Description:	Crystal structure of phosphinothricin acetyltransferase from agrobacterium tumefaciens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
N-acetyltransferase activity	6.09290029352595	bayes_pls_golite062009
N-acyltransferase activity	5.99007195691126	bayes_pls_golite062009
histone acetyltransferase activity	5.85159161781386	bayes_pls_golite062009
lysine N-acetyltransferase activity	5.85159161781386	bayes_pls_golite062009
acetyltransferase activity	4.88581443210764	bayes_pls_golite062009
acyltransferase activity	4.72881921515185	bayes_pls_golite062009
transferase activity, transferring acyl groups	4.70793039001114	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	4.69837915971204	bayes_pls_golite062009
transferase activity	3.5778020729894	bayes_pls_golite062009
	3.31223878955144	bayes_pls_golite062009
catalytic activity	1.97933499002461	bayes_pls_golite062009
glycylpeptide N-tetradecanoyltransferase activity	1.56556272138444	bayes_pls_golite062009
myristoyltransferase activity	1.56556272138444	bayes_pls_golite062009
binding	1.07749536895426	bayes_pls_golite062009
histone binding	0.582104626133107	bayes_pls_golite062009
nucleic acid binding	0.522132859536345	bayes_pls_golite062009
protein binding	0.283213965640071	bayes_pls_golite062009
transcription regulator activity	0.0766125702622449	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: