| Protein: | SPBC839.02 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 530 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC839.02.
| Description | E-value | Query Range |
Subject Range |
|
|
302.0 | [0..19] | [508..82] |
|
|
270.0 | [0..82] | [504..6] |
|
|
263.0 | [0..90] | [501..21] |
|
|
261.0 | [0..87] | [502..18] |
|
|
260.0 | [0..87] | [502..41] |
|
|
259.0 | [0..87] | [502..57] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MYIPNLRNYH DKVFPYGPSS NGYNPVIRLT DRTTQPDPSQ HIYQEEKISK CEGLSYRARE 60
61 WLLLSSNSNA RVAIALAE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [79-435] |
1 11 21 31 41 51
| | | | | |
1 PVLYLPGATS SEIQSEHSAV LRGSLCIQIY KPVKLKKIQL SFKGKSRTEW PEGIPPKLFD 60
61 TYEENSIMNH CWVFFHSEQK VDENSHGAVW YKVLPHYADT AHYPRSMECF YPGEYVYNFE 120
121 LPISCTYPES IQTDMGRVYY FLETLVDRSS TFSGKSTGRI PIELIRSPCS TSVATSEPIL 180
181 VSKSWEDRLH YEVQVGEKCV VMGQVVPVNF KFTLLGEVKF HKLRLFLMER RYYYCRQRSV 240
241 RRKEKTRQLL LYERSAPKNQ CLLSDWKQVR PDVYELSDQV RIPGCHDMAA NIVHFDTTYP 300
301 NIKITHTVRT VLRFSCENSP ELMGSAKYLE IYIDSPVRLL SCRCSDGSTM LPAYCPI
|
| Detection Method: | |
| Confidence: | 66.69897 |
| Match: | 1jsyA |
| Description: | Arrestin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.01555579124143 | bayes_pls_golite062009 |
| protein binding | 1.50286160643298 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.0676214219421661 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.0676214219421661 | bayes_pls_golite062009 |
| cation channel activity | 0.0318083563912285 | bayes_pls_golite062009 |
|
Region A: Residues: [436-530] |
1 11 21 31 41 51
| | | | | |
1 IPSSEVNFCS IDNRIIAGMN RDLALDSDII GNSPPSFDSW TAVPYQAPPP KYDDIFQSGS 60
61 SHDENHDDNY FINIFIIFLI IKHMCLITKM FLGLN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
