| Protein: | cbf12 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 963 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cbf12.
| Description | E-value | Query Range |
Subject Range |
|
|
710.0 | [0..444] | [948..7] |
|
|
709.0 | [0..445] | [948..1] |
|
|
703.0 | [0..437] | [948..1] |
|
|
701.0 | [0..444] | [948..7] |
|
|
701.0 | [0..444] | [948..7] |
|
|
697.0 | [0..444] | [948..7] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MSPNVQKRPS SEDIKTQEFY DSTRNIRRVA TAIGSINANL ESPQLYSLAK STSLQEPVRI 60
61 YGDSVSPAIS SSKAHSTSSV SPYYSEKNES QALNADGTAF ANPSFHSFG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [110-283] |
1 11 21 31 41 51
| | | | | |
1 LPQEDSQDNT QTYSTPYTTM NPSNEMHPYP PATFENNYSV LPDHSSQPNA YSFTGSNILP 60
61 TQSPSLNQMQ DYQNLQQNGS SNTTIPSFSS QHDLSQGLTH QPVPNHDEYA FSYPYELQRK 120
121 PLIPAHPVPS FRPTSALKVN MNSNVPSSDS VRNSSPNQYY ASTSKQSIPS QSQN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [284-448] |
1 11 21 31 41 51
| | | | | |
1 LQPPQKASVL GTVNNYRQYQ NSFISLNDYQ AAQSNISSPS SRFPTPYSPS VPFGTYQEKE 60
61 KSYSQDHAEL SYYQQSPSMM PPYDRSSVYF QQPLSRTDVP NQSFQQYPTT VDGGSMIPNL 120
121 YPTSAEQMGL YPQDSQNKDT YPKSLVNRPS SAVCEPARND SIPMM
|
| Detection Method: | |
| Confidence: | 3.045757 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [449-963] |
1 11 21 31 41 51
| | | | | |
1 VYSQPVTIEQ RIQYVLSNCH CLSAFYLCMP SLCQKSYGTE RRYLCPPIVL YLLGTTWLNN 60
61 VTDNLKISAQ TLEDKDNPKF AKNIFYYNAD GALISPETDI AKSTYQLTNY NENTNFDSFP 120
121 VWGNALLKTI YYTGQGKNDG FGRSTFLQLS VQSKTKYFKL ENLRLGVISK PSQKRALMKV 180
181 SDMSIRHGDC VCLFNRYRAQ HNNALFLGTS NVQRAISKVS LNMKYNSNYF PTTDAPNDAE 240
241 NEGAGLAMAN NLWEPFYIFS VDELNKGNNS NPSDSRSKVL CSNMVIILVS KITGVQSPPL 300
301 ILKKHDNWKV SLSSRAPSEA INCLSKLAFQ CHETKRFLYI DEKQSSEISF TSGELEYSDP 360
361 NDPTKATHSV LPWSAMWSII STQSVRTMFY NEPIHQNAFH VVPSMPFVKF IRLDENSMFH 420
421 IYGTGFANDV QIWMAYTRCE VKSINAFKPD TTLPPDIISD SRFSSRVYAC TANLIELICE 480
481 IPVCMFEPTV ELSPILLFQY ETLFHSGYKW PLESH
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 2f8xC |
| Description: | No description for 2f8xC was found. |
