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Protein Overview: cbf12

General Information:
Name(s) found: cbf12 / SPCC1223.13 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • CBF1/Su(H)/LAG-1 family transcription factor Cbf12 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 963 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: regulation of barrier septum formation [IMPLink to PubMed article]
    regulation of nuclear division [IMPLink to PubMed article]
    regulation of cell separation during cytokinesis [IMPLink to PubMed article]
    positive regulation of cell-cell adhesion [IMPLink to PubMed article]
    positive regulation of cell-substrate adhesion [IMPLink to PubMed article]
    positive regulation of transcription from RNA polymerase II promoter [IDALink to PubMed article]
    gene-specific transcription from RNA polymerase II promoter [RCALink to PubMed article]
    Molecular Function: DNA binding [ISSLink to PubMed article]
    transcription factor activity [IDALink to PubMed article]
    specific RNA polymerase II transcription factor activity [RCALink to PubMed article]
    transcription activator activity [IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPNVQKRPS SEDIKTQEFY DSTRNIRRVA TAIGSINANL ESPQLYSLAK STSLQEPVRI  60
   61 YGDSVSPAIS SSKAHSTSSV SPYYSEKNES QALNADGTAF ANPSFHSFGL PQEDSQDNTQ 120
  121 TYSTPYTTMN PSNEMHPYPP ATFENNYSVL PDHSSQPNAY SFTGSNILPT QSPSLNQMQD 180
  181 YQNLQQNGSS NTTIPSFSSQ HDLSQGLTHQ PVPNHDEYAF SYPYELQRKP LIPAHPVPSF 240
  241 RPTSALKVNM NSNVPSSDSV RNSSPNQYYA STSKQSIPSQ SQNLQPPQKA SVLGTVNNYR 300
  301 QYQNSFISLN DYQAAQSNIS SPSSRFPTPY SPSVPFGTYQ EKEKSYSQDH AELSYYQQSP 360
  361 SMMPPYDRSS VYFQQPLSRT DVPNQSFQQY PTTVDGGSMI PNLYPTSAEQ MGLYPQDSQN 420
  421 KDTYPKSLVN RPSSAVCEPA RNDSIPMMVY SQPVTIEQRI QYVLSNCHCL SAFYLCMPSL 480
  481 CQKSYGTERR YLCPPIVLYL LGTTWLNNVT DNLKISAQTL EDKDNPKFAK NIFYYNADGA 540
  541 LISPETDIAK STYQLTNYNE NTNFDSFPVW GNALLKTIYY TGQGKNDGFG RSTFLQLSVQ 600
  601 SKTKYFKLEN LRLGVISKPS QKRALMKVSD MSIRHGDCVC LFNRYRAQHN NALFLGTSNV 660
  661 QRAISKVSLN MKYNSNYFPT TDAPNDAENE GAGLAMANNL WEPFYIFSVD ELNKGNNSNP 720
  721 SDSRSKVLCS NMVIILVSKI TGVQSPPLIL KKHDNWKVSL SSRAPSEAIN CLSKLAFQCH 780
  781 ETKRFLYIDE KQSSEISFTS GELEYSDPND PTKATHSVLP WSAMWSIIST QSVRTMFYNE 840
  841 PIHQNAFHVV PSMPFVKFIR LDENSMFHIY GTGFANDVQI WMAYTRCEVK SINAFKPDTT 900
  901 LPPDIISDSR FSSRVYACTA NLIELICEIP VCMFEPTVEL SPILLFQYET LFHSGYKWPL 960
  961 ESH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] deduced N/A No confident structure predictions are available.
    2 View Details [110..283] MSA 6.321995 View MSA. No confident structure predictions are available.
    3 View Details [284..448] PSI-BLAST 3.045757 Sec24
    4 View Details [449..963] PSI-BLAST 1000.0 No description for 2f8xC was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle