| Protein: | SPBC16C6.12c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 470 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC16C6.12c.
| Description | E-value | Query Range |
Subject Range |
|
|
249.0 | [0..4] | [221..5] |
|
|
226.0 | [0..4] | [216..10] |
|
|
224.0 | [0..5] | [225..7] |
|
|
215.0 | [0..4] | [216..10] |
|
|
214.0 | [0..5] | [161..59] |
|
|
212.0 | [0..5] | [309..27] |
|
|
210.0 | [0..6] | [190..7] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MDMKVVPWRL KEDFLYLMSC FYNEGQEGIP DLAALFRGVE IIQAWSTRGR IPHSVESTSQ 60
61 LVSSLISNDR SQKLALAVSI SRFVSGLLDP IQQSQYAIPM AVLAKSIDLP TYFVELRHAI 120
121 THEELPSLPV LRQAAQRALS WLYDHYWNPA ATAESEDTYD Y
|
| Detection Method: |  |
| Confidence: | 89.585027 |
| Match: | PF04031.2 |
| Description: | No description for PF04031.2 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [162-323] |
1 11 21 31 41 51
| | | | | |
1 TETNELHKFE IKRKVKDLLK QWRSWRKVNV SANMFLPVEE HDYIQQFEAL VQELVTTANL 60
61 RLPYIPASFV DDEKDLDFAI ETTNLDIVVS CFLEKRVLIP SRTMPISFFP KLKNVWLPLL 120
121 QSIASKHSFF LPALFTTLWS EILEISQTVD SLVFLDLKEK EE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [324-470] |
1 11 21 31 41 51
| | | | | |
1 LTDKESAGCY LAKWYAYLMR EAYTGQPWTS TLSVTQTDLA SVLEICLQRS DPFTKIIIDE 60
61 LSILDKELEN KFSPLFQYRS DMFDSRILDE QEFEDITLEQ MKTELNKFSV RLNNIEAQAD 120
121 SSTMEFQGHV WYKPSVEPSP IGQIIES
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.627 | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.591 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.591 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.575 | f.56.1 | Description not found. |
| View | Download | 0.570 | d.379.1 | Description not found. |
| View | Download | 0.558 | a.130.1 | Chorismate mutase II |
| View | Download | 0.547 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.522 | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.473 | a.19.1 | Fertilization protein |
| View | Download | 0.455 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
