| Protein: | SPCC18.12c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 260 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC18.12c.
| Description | E-value | Query Range |
Subject Range |
|
|
245.0 | [0..1] | [239..1] |
|
|
244.0 | [0..1] | [239..1] |
|
|
243.0 | [0..1] | [259..1] |
|
|
242.0 | [0..1] | [238..1] |
|
|
236.0 | [0..1] | [238..1] |
|
|
234.0 | [0..1] | [238..1] |
|
|
223.0 | [0..1] | [243..1] |
|
|
220.0 | [0..1] | [236..1] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MRQKRAKNYR KLMHTYQLLF GFREPYQVLV DADFLKDLSQ QKIDIQAALA RTVQGAIKPM 60
61 ITQCCIRQLY SKSDELKQEI RIAKSFERRR CGHIDEALSP SECIQSVVNI NGRNKHRYVV 120
121 ATQDPELRQA LRSVPGVPLI YMKRSVVILE PASRATLLEK HN
|
| Detection Method: |  |
| Confidence: | 18.39794 |
| Match: | 1o4wA |
| Description: | Hypothetical protein AF0591 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nuclease activity | 2.9643999717473 | bayes_pls_golite062009 |
| exonuclease activity | 2.73966722455965 | bayes_pls_golite062009 |
| DNA binding | 2.08813762501061 | bayes_pls_golite062009 |
| nucleic acid binding | 1.94354032094901 | bayes_pls_golite062009 |
| flap endonuclease activity | 1.93047867791632 | bayes_pls_golite062009 |
| endonuclease activity | 1.76157945742159 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 1.70282544747112 | bayes_pls_golite062009 |
| 5'-3' exonuclease activity | 1.66809858159343 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 1.62584843390946 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.54085341767512 | bayes_pls_golite062009 |
| endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.5104333947608 | bayes_pls_golite062009 |
| binding | 1.47549397931841 | bayes_pls_golite062009 |
| catalytic activity | 1.37534898662234 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.0761952249864 | bayes_pls_golite062009 |
| hydrolase activity | 0.791080797012892 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 0.50487165366129 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 0.421194877842092 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.404818231616342 | bayes_pls_golite062009 |
| 5'-3' exodeoxyribonuclease activity | 0.34527101309477 | bayes_pls_golite062009 |
| protein binding | 0.257628793674867 | bayes_pls_golite062009 |
| double-stranded DNA specific exodeoxyribonuclease activity | 0.123105804280941 | bayes_pls_golite062009 |
| single-stranded DNA specific exodeoxyribonuclease activity | 0.120278857913627 | bayes_pls_golite062009 |
|
Region A: Residues: [163-260] |
1 11 21 31 41 51
| | | | | |
1 KESVQMGMSK EEKLLLSGKK RSANELAIDD QDTKESTDLA GTEDSAPKAN KKRKGPKGPN 60
61 PLSIKKRSSK NHTTDEPTLP VNIIGDVGER KKHRRKRK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
