YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC1271.07c
Organism:	Schizosaccharomyces pombe
Length:	163 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC1271.07c.

Description	E-value	Query Range	Subject Range
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	118.0	[0..5]	[159..2]
gi\|167039151, gi... - gi\|167039151\|ref\|YP_001662136.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp.... gi\|76797381, gi\|... - gi\|76797381\|ref\|ZP_00779704.1\| Ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter ethan... gi\|241884906, gi... - gi\|241902652\|ref\|ZP_04787384.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter broc... gi\|242230040, gi... - gi\|242258437\|ref\|ZP_04803241.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp. ...	116.0	[0..5]	[159..1]
gi\|219992356, gi... - gi\|89210568\|ref\|ZP_01188956.1\| Ribosomal-protein-alanine acetyltransferase [Halothermothrix orenii H...	113.0	[0..5]	[161..1]
gi\|254703435 - gi\|254703435\|ref\|ZP_05165263.1\| phosphinothricin N-acetyltransferase [Brucella suis bv. 3 str. 686] gi\|23348505, gi\|... - gi\|23502509\|ref\|NP_698636.1\| acetyltransferase [Brucella suis 1330], gi\|23348505\|gb\|AAN30551.1\| acet... gi\|161619584, gi... - gi\|161619584\|ref\|YP_001593471.1\| phosphinothricin N-acetyltransferase [Brucella canis ATCC 23365], g...	111.0	[0..5]	[161..1]
gi\|25286364 - pir\|\|AE3299 phosphinothricin N-acetyltransferase (EC 2.3.1.-) [imported] - Brucella melitensis (stra... gi\|17986662, gi\|... - gi\|17986662\|ref\|NP_539296.1\| phosphinothricin N-acetyltransferase [Brucella melitensis 16M], gi\|1798...	110.0	[0..5]	[161..1]
gi\|62290525, gi\|... - gi\|62290525\|ref\|YP_222318.1\| acetyltransferase [Brucella abortus bv. 1 str. 9-941], gi\|62196657\|gb\|A... gi\|82700441 - gi\|82700441\|ref\|YP_415015.1\| GCN5-related N-acetyltransferase [Brucella melitensis biovar Abortus 23... gi\|82616542 - gi\|82616542\|emb\|CAJ11620.1\| GCN5-related N-acetyltransferase [Brucella melitensis biovar Abortus 230... gi\|254689823 - gi\|254689823\|ref\|ZP_05153077.1\| GCN5-related N-acetyltransferase [Brucella abortus bv. 6 str. 870] gi\|254697971 - gi\|254697971\|ref\|ZP_05159799.1\| GCN5-related N-acetyltransferase [Brucella abortus bv. 2 str. 86/8/5... gi\|254730857 - gi\|254730857\|ref\|ZP_05189435.1\| GCN5-related N-acetyltransferase [Brucella abortus bv. 4 str. 292]	110.0	[0..5]	[161..1]
Y1207_METJA, YC0... - (Q58604) Hypothetical acetyltransferase MJ1207 (EC 2.3.1.-), Uncharacterized N-acetyltransferase MJ1... Y1207_METJA - Uncharacterized N-acetyltransferase MJ1207 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM...	109.0	[0..6]	[161..74]
gi\|83814822, gi\|... - gi\|83814822\|ref\|YP_445515.1\| acetyltransferase [Salinibacter ruber DSM 13855], gi\|83756216\|gb\|ABC443...	108.0	[0..8]	[161..31]
gi\|14521872, gi\|... - gi\|5459092\|emb\|CAB50578.1\| N-terminal acetyltransferase [Pyrococcus abyssi GE5], gi\|14521872\|ref\|NP_... gi\|5459092, gi\|7... - pir\|\|D75017 n-terminal acetyltransferase PAB1098 - Pyrococcus abyssi (strain Orsay), gi\|5459092\|emb...	108.0	[0..7]	[160..20]
gi\|37200543, gi\|... - gi\|37676003\|ref\|NP_936399.1\| histone acetyltransferase HPA2 [Vibrio vulnificus YJ016], gi\|37200543\|d... gi\|27367875, gi\|... - gi\|27367875\|ref\|NP_763402.1\| histone acetyltransferase HPA2 [Vibrio vulnificus CMCP6], gi\|27359448\|g...	108.0	[0..5]	[159..1]

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Predicted Domain #1

Region A:
Residues: [1-163]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKPSNISIS AVKLPQDLDD FKMLVQEYLQ EFGMDLTFQN VDDELANPMR KYGPPHGIML  60
   61 VARDEHGTAL GCVAVHPFGG PGCCEMKRLY VRPESRGLKL GVLLVKEIIQ YSEKLGYSSM 120
  121 VLDTLDTLLP AVRLYKSFGF KTTEPYYHNP IPNVVYMRLE MSK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.69897
Match:	1yr0A
Description:	Crystal structure of phosphinothricin acetyltransferase from agrobacterium tumefaciens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
N-acetyltransferase activity	6.09290029352595	bayes_pls_golite062009
N-acyltransferase activity	5.99007195691126	bayes_pls_golite062009
histone acetyltransferase activity	5.85159161781386	bayes_pls_golite062009
lysine N-acetyltransferase activity	5.85159161781386	bayes_pls_golite062009
acetyltransferase activity	4.88581443210764	bayes_pls_golite062009
acyltransferase activity	4.72881921515185	bayes_pls_golite062009
transferase activity, transferring acyl groups	4.70793039001114	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	4.69837915971204	bayes_pls_golite062009
transferase activity	3.5778020729894	bayes_pls_golite062009
	3.16935811078335	bayes_pls_golite062009
catalytic activity	1.97933499002461	bayes_pls_golite062009
glycylpeptide N-tetradecanoyltransferase activity	1.56556272138444	bayes_pls_golite062009
myristoyltransferase activity	1.56556272138444	bayes_pls_golite062009
binding	0.632534855891142	bayes_pls_golite062009
nucleic acid binding	0.522132859536345	bayes_pls_golite062009
transcription regulator activity	0.0766125702622449	bayes_pls_golite062009
protein binding	0.0596470189462109	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: