| Protein: | mcp5 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 968 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mcp5.
| Description | E-value | Query Range |
Subject Range |
|
|
359.0 | [0..1] | [680..2065] |
|
|
345.0 | [0..712] | [960..304] |
|
|
315.0 | [0..709] | [963..1445] |
|
|
285.0 | [0..711] | [963..1486] |
|
|
284.0 | [0..1] | [680..1012] |
|
|
281.0 | [0..712] | [961..769] |
|
|
271.0 | [0..712] | [961..1547] |
|
|
261.0 | [0..710] | [960..1254] |
|
Region A: Residues: [1-325] |
1 11 21 31 41 51
| | | | | |
1 MEKKQDNEVE LYSIDLKNRN ESAKIKLAYA KALEESILCE TRKIEQEIKD QVVQKENKTY 60
61 FNNKFDNRYK LRDLEKNLAE EEVRITEMLT IQRQDIAIER RKNTNCFSES SQVDQYSVTE 120
121 TNLQYATNIG LNLLQQLRYL RLQLSEKEDL HKKLSVDNAH LIKQLDLLSS NMKTLMKEKT 180
181 KVQGQRDLLE QRLQGLMKKL TEVESLTVSL NDEKNKLTLE LTNLRICLHE LQLNAEKGET 240
241 IDESEDSKNT LVTEDENDDS VFLESSSDKY FDSSSFDAEQ EEKHDFPIDP FLSLESNVQT 300
301 SVSQSSAVLK SINLAKQELV SVNHL
|
| Detection Method: |  |
| Confidence: | 19.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [326-463] |
1 11 21 31 41 51
| | | | | |
1 VADDTKTPSP NLSSEIIENT KADIKKSIRS LNKAVSPENS IDIEDETDRD DEFICFLLSY 60
61 QQLQKALKSN LGLFQLSCLY PLSLNHLIQS FFQSLTSQIS IKDIDSKNKQ VIKLFKPTKS 120
121 SDRQEIFELA QFEPRQKF
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [464-710] |
1 11 21 31 41 51
| | | | | |
1 PIDTNSSKCD MSASTEMHLK DTEKFANFKL KENILNHSSI YERDVSYLPA LNKGGRENYL 60
61 NNRVSSYRLV KPILNSYGNH VLNRIQHDIL ENHFCCLKNV KDFVCGANTI SMQWNLQKNM 120
121 EFISSVFSLI KNEVNDTSAN SVILRTDALS NVATTRLKRK LTSAIIDCSI PRRRLRHYSN 180
181 PEIAEFKNFR LSTDISHSNV RNSKKLCSNG SMNCMRQGKA VFPRKIPYQE HDWEQWEKIA 240
241 QSSMFKN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [711-785] |
1 11 21 31 41 51
| | | | | |
1 RSIASRQSLE TSDVTLDINM SSRHSNGTSS MLFKDFTKHN NWEASTYPSA PKNTRTYPTA 60
61 EVEKTRHDSS QSARQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [786-968] |
1 11 21 31 41 51
| | | | | |
1 LKARSTATTI SISLSTVSDV FTLPRNNLKS KTNTKKCRDN LNLSGLSSST CNANSVNKLM 60
61 KHVMMGNEMM KYPRSESFKM FKKSHWRYFW INPHCEMLCW SKTNPFIEKG RKNQVKSVKI 120
121 KGMTIIKAPD ALKNANLHNE VIVMQTTDKP IVLKAKSKKI HNIWVQAIKQ INHKAIFDTK 180
181 PGI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
