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Protein Overview: mcp5

General Information:
Name(s) found: mcp5 / SPBC216.02 [Sanger Pombe]
Description(s) found:
Found 22 descriptions.
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  • cortical anchoring factor for dynein Mcp5/Num1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 968 amino acids

    Gene Ontology:
    Cellular Component: cell cortex [IDALink to PubMed articleLink to PubMed article]
    cortical microtubule cytoskeleton [NASLink to PubMed article]
    Biological Process: dynein-driven meiotic oscillatory nuclear movement [IMPLink to PubMed articleLink to PubMed article]
    cortical protein anchoring [IMPLink to PubMed articleLink to PubMed article]
    microtubule sliding [IMPLink to PubMed article]
    meiotic chromosome segregation [IMPLink to PubMed article]
    synapsis [NASLink to PubMed article]
    cellular protein localization [IGILink to PubMed articleLink to PubMed article]
    Molecular Function: protein anchor [IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKQDNEVE LYSIDLKNRN ESAKIKLAYA KALEESILCE TRKIEQEIKD QVVQKENKTY  60
   61 FNNKFDNRYK LRDLEKNLAE EEVRITEMLT IQRQDIAIER RKNTNCFSES SQVDQYSVTE 120
  121 TNLQYATNIG LNLLQQLRYL RLQLSEKEDL HKKLSVDNAH LIKQLDLLSS NMKTLMKEKT 180
  181 KVQGQRDLLE QRLQGLMKKL TEVESLTVSL NDEKNKLTLE LTNLRICLHE LQLNAEKGET 240
  241 IDESEDSKNT LVTEDENDDS VFLESSSDKY FDSSSFDAEQ EEKHDFPIDP FLSLESNVQT 300
  301 SVSQSSAVLK SINLAKQELV SVNHLVADDT KTPSPNLSSE IIENTKADIK KSIRSLNKAV 360
  361 SPENSIDIED ETDRDDEFIC FLLSYQQLQK ALKSNLGLFQ LSCLYPLSLN HLIQSFFQSL 420
  421 TSQISIKDID SKNKQVIKLF KPTKSSDRQE IFELAQFEPR QKFPIDTNSS KCDMSASTEM 480
  481 HLKDTEKFAN FKLKENILNH SSIYERDVSY LPALNKGGRE NYLNNRVSSY RLVKPILNSY 540
  541 GNHVLNRIQH DILENHFCCL KNVKDFVCGA NTISMQWNLQ KNMEFISSVF SLIKNEVNDT 600
  601 SANSVILRTD ALSNVATTRL KRKLTSAIID CSIPRRRLRH YSNPEIAEFK NFRLSTDISH 660
  661 SNVRNSKKLC SNGSMNCMRQ GKAVFPRKIP YQEHDWEQWE KIAQSSMFKN RSIASRQSLE 720
  721 TSDVTLDINM SSRHSNGTSS MLFKDFTKHN NWEASTYPSA PKNTRTYPTA EVEKTRHDSS 780
  781 QSARQLKARS TATTISISLS TVSDVFTLPR NNLKSKTNTK KCRDNLNLSG LSSSTCNANS 840
  841 VNKLMKHVMM GNEMMKYPRS ESFKMFKKSH WRYFWINPHC EMLCWSKTNP FIEKGRKNQV 900
  901 KSVKIKGMTI IKAPDALKNA NLHNEVIVMQ TTDKPIVLKA KSKKIHNIWV QAIKQINHKA 960
  961 IFDTKPGI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..325] PSI-BLAST 19.39794 Heavy meromyosin subfragment
    2 View Details [326..463] PSI-BLAST 8.0 Tropomyosin
    3 View Details [464..710] deduced N/A No confident structure predictions are available.
    4 View Details [711..785] deduced N/A No confident structure predictions are available.
    5 View Details [786..968] MSA 1.012954 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle