| Protein: | SPBC947.05c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 564 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC947.05c.
| Description | E-value | Query Range |
Subject Range |
|
|
344.0 | [0..8] | [563..368] |
|
|
342.0 | [0..3] | [563..356] |
|
|
341.0 | [0..5] | [563..311] |
|
|
340.0 | [0..3] | [563..357] |
|
|
338.0 | [0..3] | [563..356] |
|
|
337.0 | [0..7] | [563..346] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MILARDDKWT LGSIALIFVL LIGFALLFLL ERFRVKEKSR TFKDCVNVYQ CPSKGERVYL 60
61 ALRHWFIFLA THKAQMTLIL SPLVMLVTIP FTGKETKNSI ASYDWNLTGV AARLGYLSCG 120
121 LFFVSYFFSL KNNPFCLMLF SSHEKMNYLH RWLSVYAVLI SVLHGILFMI F
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [172-260] |
1 11 21 31 41 51
| | | | | |
1 SAQSYKPLLY DKISIYGYFI TVVLFLMTVA SLPSVRRKFF EWFFVLHHTC SVLIIFLIWL 60
61 HHPRTIVYMK ACIIIYAFDR GCRLFRSIW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [261-564] |
1 11 21 31 41 51
| | | | | |
1 NRSNFRIYLL NEDMIYMVGR KPKRSFFALP WAAGSHVYIN IPSLSYWQVH PFTLASAPFD 60
61 DFIELFVAVH SGFTERLANR LYSMPHEYPN FSLAPGTPES LSNTYRELNS FKSYAVEIEN 120
121 TAQGHTYEPE DLYLETTVFM DGPYGTTSNV FKEYSYVLLI AGGVGFSYTL PILRDLILKE 180
181 CNVTSITFIW SCRSLSLLKV ASKSLNSLLH QSNVRLKIIN HFTGSISCKE SSEFSNQTTE 240
241 NSEMEFFDDR PDLDMYIQKF FDYVGYQTAA LAACGSQSFL KRIKNSVNKS ISSTTDIYQH 300
301 YEEL
|
| Detection Method: | |
| Confidence: | 36.69897 |
| Match: | 1ndhA |
| Description: | CRYSTAL STRUCTURE OF NADH-CYTOCHROME B5 REDUCTASE FROM PIG LIVER AT 2.4 ANGSTROMS RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.13408475648113 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor | 0.621003175053315 | bayes_pls_golite062009 |
| protein binding | 0.144900113694048 | bayes_pls_golite062009 |
| cofactor binding | 0.0731141170494622 | bayes_pls_golite062009 |
