| Protein: | SPAC24C9.08 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 596 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC24C9.08.
| Description | E-value | Query Range |
Subject Range |
|
|
278.0 | [0..19] | [594..8] |
|
|
252.0 | [0..105] | [592..1] |
|
|
252.0 | [0..23] | [593..4] |
|
|
251.0 | [0..105] | [592..10] |
|
|
249.0 | [0..107] | [595..5] |
|
|
249.0 | [0..107] | [593..5] |
|
|
249.0 | [0..107] | [595..5] |
|
Region A: Residues: [1-104] |
1 11 21 31 41 51
| | | | | |
1 MSTSNDPVVS SHDPIKQEKE QETDLEAQVE HKKRNERGNA FVGFLILIFV YYLLRGGSND 60
61 NDKQEMSHSP GSCMDSESAA VSTSAKCYIP PVLTPAKEPK LGDD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [105-596] |
1 11 21 31 41 51
| | | | | |
1 VSGIDYIRSP EFFNDSLVRF QELLRIPTVC YDDMGDVGDD DRFDIFAVFQ DKVRELYPNI 60
61 FKKLKVEYVN TYGLLITLEG SNKDLKPLVL MGHQDVVPVN QASLDRWYFP PFSATYHNGH 120
121 VYSRGAADDK NSVVAILEAL EILAISDYKP EQTVIASFGF DEEVSGYRGA LPLAHKLYER 180
181 YGKDGVALIL DEGGFTINLF GTLFATVCVA EKGYMDVHLK LKTPGGHASI PPPHTNIGLM 240
241 SKLVTQIEEP FGGELTFENP FYTTLQCFAE NSADMDDNLR QLIKSGDTEK MTDLFSKSRL 300
301 YRYFFETSIA VDVINGGVKV NALPEETTLA VNHRVDASKG LKQVYDRYGG LLEEFGHEYH 360
361 VNVTLFNGET VVEYEDAIGH IFASTAKTLE PSPVSPYDES SDAYKKLAGA IRYTFGDGTS 420
421 VTPALMPANT DTRHYWNLTS NIYRWTPVST NSTSKNSFNG HTINENMRYD AHMDSIEFFY 480
481 NFILVSDSGE EA
|
| Detection Method: | |
| Confidence: | 54.221849 |
| Match: | 1vgyA |
| Description: | Crystal structure of succinyl diaminopimelate desuccinylase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 4.61719816036179 | bayes_pls_golite062009 |
| peptidase activity | 4.41512153958838 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.59809762149163 | bayes_pls_golite062009 |
| catalytic activity | 2.00064748759729 | bayes_pls_golite062009 |
| exopeptidase activity | 0.906571162336786 | bayes_pls_golite062009 |
| binding | 0.767655217795721 | bayes_pls_golite062009 |
| endopeptidase activity | 0.529831416345723 | bayes_pls_golite062009 |
| carboxypeptidase activity | 0.389857234977383 | bayes_pls_golite062009 |
