| Protein: | SPBC800.13 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 479 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC800.13.
| Description | E-value | Query Range |
Subject Range |
|
|
379.0 | [0..1] | [470..1] |
|
|
329.0 | [0..1] | [470..1] |
|
|
318.0 | [0..52] | [405..1] |
|
|
303.0 | [0..1] | [470..1] |
|
|
298.0 | [0..1] | [470..1] |
|
|
292.0 | [0..1] | [470..1] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MASHNYETPL KSSSFQHLVG TLSQRRHFTP SRSRYTPRSA QRTVTPHKRR ALARRNSLAR 60
61 RRSNVFSAT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [70-379] |
1 11 21 31 41 51
| | | | | |
1 TPRDILRMLS RALAKNPVPS PAESESSERR HTPQTNSQKS QKTPRLSSNK RRTLKNDAKQ 60
61 RNSQSPGTDT SDANLTIQSI EAPRRAPQRL SDFFTPDGRR VSNIRDSLIS EKRLENNIDQ 120
121 VQESALSTAS SNRLIDLKND EVPIFRIPLS DYETDDMDDG TPLQRHVATL NQYQSPIFNL 180
181 GPDILEDEPS YSSRASRSRQ SSLSSRLSEL PSKRASLEIL RRENTFPADP IQEFGEKAYN 240
241 ERELMEEISN FEPLLDDNLL ENANEAVNSP VVDAPMDADS ALEIPNDEDN GEILNKLKDS 300
301 PFKKPKRRYS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [380-479] |
1 11 21 31 41 51
| | | | | |
1 KSSTLVLPET NIRKLANSYS QKKIAGSVIE ELTTASELFF KQIANDLSAF ADHAHRKTID 60
61 TQDVVLLMKR QRKISEKKSL SSLMQQYLSR EIAPPAIKRT
|
| Detection Method: | |
| Confidence: | 33.69897 |
| Match: | 1n1jA |
| Description: | Nuclear transcription factor Y subunit beta (Nf-Yb3) |
Matching Structure (courtesy of the PDB): |
|
