YRC Public Data Repository - Protein Structure Prediction

Protein:	mug58
Organism:	Schizosaccharomyces pombe
Length:	277 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mug58.

Description	E-value	Query Range	Subject Range
gi\|1749676, gi\|1... - gi\|1749676\|dbj\|BAA13895.1\| unnamed protein product [Schizosaccharomyces pombe], gi\|11281984\|pir\|\|T43...	209.0	[0..1]	[277..1]
gi\|23130235, gi\|... - gi\|23130235\|ref\|ZP_00112052.1\| COG4240: Predicted kinase [Nostoc punctiforme PCC 73102], gi\|18668528...	173.0	[0..14]	[277..90]
gi\|75700979, gi\|... - gi\|75907254\|ref\|YP_321550.1\| glycerate kinase [Anabaena variabilis ATCC 29413], gi\|75700979\|gb\|ABA20...	170.0	[0..14]	[277..76]
gi\|46120254, gi\|... - gi\|67920531\|ref\|ZP_00514051.1\| conserved hypothetical protein [Crocosphaera watsonii WH 8501], gi\|67...	170.0	[0..1]	[276..78]
gi\|17230365, gi\|... - gi\|17230365\|ref\|NP_486913.1\| hypothetical protein alr2873 [Nostoc sp. PCC 7120], gi\|17131967\|dbj\|BAB... gi\|25529990 - pir\|\|AB2165 hypothetical protein alr2873 [imported] - Nostoc sp. (strain PCC 7120)	169.0	[0..14]	[277..77]
gi\|145011545, gi... - gi\|39975849\|ref\|XP_369315.1\| hypothetical protein MGG_06149 [Magnaporthe grisea 70-15], gb\|EAA53021....	165.0	[0..3]	[275..26]
gi\|32421001, gi\|... - gi\|32421001\|ref\|XP_330944.1\| hypothetical protein [Neurospora crassa], gi\|28923631\|gb\|EAA32802.1\| hy... gi\|85105799 - gi\|85105799\|ref\|XP_962038.1\| hypothetical protein [Neurospora crassa OR74A]	163.0	[0..3]	[275..47]
gi\|158140695, gi... - gi\|158320496\|ref\|YP_001513003.1\| signal recognition particle protein [Alkaliphilus oremlandii OhILAs...	162.0	[0..4]	[258..76]
gi\|46097472, gi\|... - gi\|71006610\|ref\|XP_757971.1\| hypothetical protein UM01824.1 [Ustilago maydis 521], ref\|XP_399439.1\| ...	160.0	[0..7]	[277..21]
gi\|20807909 - gi\|20807909\|ref\|NP_623080.1\| Signal recognition particle GTPase [Thermoanaerobacter tengcongensis MB... gi\|20807909, gi\|... - gi\|20807909\|ref\|NP_623080.1\| Signal recognition particle GTPase [Thermoanaerobacter tengcongensis MB...	159.0	[0..4]	[275..77]

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Predicted Domain #1

Region A:
Residues: [1-277]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLEIIVDK ILKFLEKQPK PEGRPFILGI SGPQGSGKST LASALDTELT RKNESVVKFS  60
   61 LDDFYLTHAE QVELAKNNPN NPLVQHRGLA GTHDVTFLNN VLNAFVKGSD EEVSIPFYDK 120
  121 SKFGGYGDRG DESQWKKANP KTTTYVIFEG WMVGFEPLDS CMLSVRARST RWQNIEGSLL 180
  181 WVNRKLADYQ PIFQKIDSLV ELEAQEINYV YRWRLQQEHA LKARIHKGMS DEEVIEFVNH 240
  241 YMPQYVFYLG TLSNKVHLNP HCLEIILDEN RYPVVMH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	30.154902
Match:	1odfA
Description:	Structure of YGR205w protein.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	1.26687146372087	bayes_pls_golite062009
nucleoside-triphosphatase activity	0.420384345567397	bayes_pls_golite062009
pyrophosphatase activity	0.411077559082206	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	0.399864241228259	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	0.398496265411009	bayes_pls_golite062009
catalytic activity	0.234613562021476	bayes_pls_golite062009
hydrolase activity	0.216831145240405	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: