| Protein: | SPAC7D4.12c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 759 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC7D4.12c.
| Description | E-value | Query Range |
Subject Range |
|
|
442.0 | [0..2] | [758..4] |
|
|
431.0 | [0..114] | [757..393] |
|
|
428.0 | [0..110] | [758..12] |
|
|
408.0 | [0..6] | [759..67] |
|
|
390.0 | [0..68] | [755..253] |
|
|
382.0 | [0..86] | [758..290] |
|
|
379.0 | [0..215] | [758..461] |
|
|
379.0 | [0..282] | [758..313] |
|
|
369.0 | [0..58] | [759..113] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MDGNRRVRFN TDRRPYLSPL QTSFPSSTSF QTPTFLIEED DEDTEDDDGP QVLPVHRAPS 60
61 PAAFRKRGSI TSMDQYLVNM PAVPSPTASK VGLLDARNTD VESYAASYKT QSSSNS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [117-313] |
1 11 21 31 41 51
| | | | | |
1 VNSLPMRRPT LDRSYSAPMI AAKNLQSDPE KMSNVESTNE LPSTTTEAYK LVAAHTAARL 60
61 EHMRLNALKA ANDEGEDVKD NEQDDNIDES DPFANPKASY RGGVLSNLLK LYTNSNTVTS 120
121 SRISLKHTDP TKWQKHAKRT ASSNSLTDLL HASNQTFMAP ASGLQSTEEI PQFSKTGHSR 180
181 GRKFNFHHHS RKNSGLN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [314-416] |
1 11 21 31 41 51
| | | | | |
1 EEYKITIHLA DILQRQKYIL KLCRALMVYG APSHRLEEHM ASAAKVLEIE GQFLYIPGCM 60
61 IVSFGDVNTH TSDMHIVRVN QTIDLGRLKL VHDIYKAVLH DRM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.876 | 0.839 | endoplasmic reticulum | d.110.4 | SNARE-like |
| View | Download | 0.639 | 0.839 | endoplasmic reticulum | c.54.1 | IIA domain of mannose transporter, IIA-Man |
| View | Download | 0.630 | 0.839 | endoplasmic reticulum | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.684 | 0.839 | endoplasmic reticulum | a.126.1 | Serum albumin-like |
| View | Download | 0.708 | 0.839 | endoplasmic reticulum | d.199.1 | DNA-binding C-terminal domain of the transcription factor MotA |
|
Region A: Residues: [417-759] |
1 11 21 31 41 51
| | | | | |
1 GVEEAIRGLD EIFKSPPYFR TWILVVFYGF ASATILPMSF QGGWIDLPIA FILGCLVGIL 60
61 QHYIAPRSTM YNSLFEVTGS IITSFLSRAF GSIRYSGGRR FCFSALAEGA IVLILPGYIV 120
121 LCGSLELQSK NIVAGGVRMF YAIIYSLFLS FGISIGAALY GWMDHNATDS TSCPVSTQMD 180
181 DKWKILFVPL FTLCLLIVNQ ARPSQWPVSI FISCAGYVVN YFTAKHFGSN PIANAIGSFA 240
241 IGCLGNIYSR LGRGVAFAAV LPAIFVQVPS GLAAQGGISS GIEVATSLTN NTYNTSSSST 300
301 LDVNSLKFGL VMVQIAIGIS VGLFASALVV YPFGKRRSGL FSF
|
| Detection Method: | |
| Confidence: | 66.0 |
| Match: | 2nuuA |
| Description: | No description for 2nuuA was found. |
| Term | Confidence | Notes |
| cation transmembrane transporter activity | 3.37551746791562 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.46309977364589 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 2.43363909456767 | bayes_pls_golite062009 |
| organic cation transmembrane transporter activity | 2.28889582696925 | bayes_pls_golite062009 |
| ammonium transmembrane transporter activity | 2.28258580483562 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.24340667591076 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.13062477643948 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.91632548941379 | bayes_pls_golite062009 |
| transporter activity | 1.87457067022308 | bayes_pls_golite062009 |
