| Protein: | erf1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 390 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for erf1.
| Description | E-value | Query Range |
Subject Range |
|
|
452.0 | [0..2] | [388..19] |
|
|
452.0 | [0..1] | [386..1] |
|
|
451.0 | [0..1] | [386..1] |
|
|
451.0 | [0..1] | [388..1] |
|
|
448.0 | [0..1] | [386..1] |
|
|
448.0 | [0..1] | [386..1] |
|
Region A: Residues: [1-390] |
1 11 21 31 41 51
| | | | | |
1 MKLIQKNIEK NGSGWITMCP EEPEDMWHLY NILQVGDQLK ASTVRRVVKV GATGSTSGSR 60
61 VVMKLRILVE NMDFDTKAAQ LHIKGRTTEY HPEVKMGSYH TLDLELHRNF TLYKNEWDAF 120
121 ALDRVDAACN PSRNAEIGAV VLDEGLANIC LITDYMTILR QRIDQVIPRK RRGDSSAYQK 180
181 GLDKFYDSVF QSINSEFDFD KLKVVILASP GFVARGLYDY IFSMAVKLDL KQIVKSKNKF 240
241 VILHSSTGHI HSLNEILKDP AVESKLADTK YVQEIRVLNK FYDVMNEDDR KAWYGPNHVL 300
301 KAFELGAIGE LLISDSLFRS SDIATRKKWV SLVEGVKEIN CPVYIFSSLH ESGKQLDLLS 360
361 GIAAILTYPV DEEDISEDEE DEESQNFEHS
|
| Detection Method: |  |
| Confidence: | 124.0 |
| Match: | 1dt9A |
| Description: | Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1; C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1; N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 3.8176240743328 | bayes_pls_golite062009 |
| translation release factor activity | 3.48975835887408 | bayes_pls_golite062009 |
| translation termination factor activity | 3.46050614877315 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.50763528378297 | bayes_pls_golite062009 |
| binding | 2.24516466558786 | bayes_pls_golite062009 |
| structural molecule activity | 2.17996532926344 | bayes_pls_golite062009 |
| nucleic acid binding | 2.09371417164502 | bayes_pls_golite062009 |
| translation regulator activity | 1.83257472130927 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.81472167858216 | bayes_pls_golite062009 |
| mRNA binding | 1.38466459724533 | bayes_pls_golite062009 |
| 1.36644447800624 | bayes_pls_golite062009 | |
| ribonuclease activity | 0.519765773143644 | bayes_pls_golite062009 |
| protein binding | 0.381324299701367 | bayes_pls_golite062009 |
| hydrolase activity | 0.341035995293011 | bayes_pls_golite062009 |
| catalytic activity | 0.264002643439785 | bayes_pls_golite062009 |
