| Protein: | tfb4 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 297 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tfb4.
| Description | E-value | Query Range |
Subject Range |
|
|
364.0 | [0..1] | [292..1] |
|
|
325.0 | [0..20] | [290..5] |
|
|
323.0 | [0..20] | [290..5] |
|
|
323.0 | [0..20] | [290..5] |
|
|
322.0 | [0..20] | [290..5] |
|
|
319.0 | [0..20] | [290..5] |
|
Region A: Residues: [1-297] |
1 11 21 31 41 51
| | | | | |
1 MDEFQTLKQN ASWDISEDAN DTPSLLVVIL DANPASWYSL SKKVPVSKVL ADITVFLNAH 60
61 LAFHHDNRVA VLASHSDKVE YLYPSIAPEQ KVAEVDPTKE ANTYRKFREV DDLVLSGMKR 120
121 LMSSTDKVSR KTMISGALSR ALAYINQVQN KNTLRSRILI FSLTGDVALQ YIPTMNCIFC 180
181 AQKKNIPINV CNIEGGTLFL EQAADATGGI YLKVDNPKGL LQYLMMSLFP DQNLRKHLNT 240
241 PNQANVDFRA TCFCHKKVLD IGFVCSVCLS IFCEPRVHCS TCHTKFTVEP MSKKLHT
|
| Detection Method: |  |
| Confidence: | 2.38 |
| Match: | 1q0pA |
| Description: | A domain of Factor B |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.68315152218267 | bayes_pls_golite062009 |
| nucleic acid binding | 2.10023916482665 | bayes_pls_golite062009 |
| DNA binding | 1.9295508897092 | bayes_pls_golite062009 |
| protein complex binding | 1.65763332955233 | bayes_pls_golite062009 |
| protein binding | 1.42792331963866 | bayes_pls_golite062009 |
| hydrolase activity | 0.589248272940562 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.446181458443121 | bayes_pls_golite062009 |
| protein dimerization activity | 0.244402438311177 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.114607758890868 | bayes_pls_golite062009 |
| catalytic activity | 0.0380261580236634 | bayes_pls_golite062009 |
