| Protein: | SPAC2C4.17c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 840 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC2C4.17c.
| Description | E-value | Query Range |
Subject Range |
|
|
447.0 | [0..23] | [822..63] |
|
|
441.0 | [0..10] | [825..39] |
|
|
404.0 | [0..8] | [684..199] |
|
|
403.0 | [0..8] | [805..117] |
|
Region A: Residues: [1-247] |
1 11 21 31 41 51
| | | | | |
1 MNEHRREPHR RSGYQDDSAF TNTEKLVDEL DHNVEPEQLL EKNRTDFKLM YVIVKFYRWF 60
61 NNLSFITRWI TIWFPLAGAL VIPLAVGVSP YPNAKLGGVR IFWIFVWLEV AWGGFWVSRV 120
121 IARLLPYILY PLMGILPFTM YKYTVILTAL EMPLAIFFCS IVCVCTFSPI MIGKGNFTST 180
181 TVTTTTSATA TPTASASSNA VESVFVTKTA ASVPSWIKVI TKILGAAVVT SIVLLLEKIF 240
241 LHFIGFH
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [248-311] |
1 11 21 31 41 51
| | | | | |
1 YHEVQYQYRI TDNKRNTAVL AKLLTAALDA PYHDSPRVRR QDYLLGLIDT RSMSESKGSG 60
61 NGKL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [312-668] |
1 11 21 31 41 51
| | | | | |
1 RKVKKISKNA KRIFSKTRNA ISTAFTDMLG KHAKDLTPEQ EFILETIRSK KKCLALARKI 60
61 WYSLVPEGED CFQKEDLIGL IPDDEINDIF HILDNDYSRT VTLDEMEQFT REISIEFRSI 120
121 SSSLRDVDLA LGKLDRVGLG VVGIIAVLTF ISFLDTSFAT ILAAFGTTLL SLSFVFSTSA 180
181 QELMSSIIFL FSKHPFDISD VVIVNNIKYE VVSLSLLFTV FRTMGGSTVQ APNSLLNTLF 240
241 IENLRRSQPQ SETITIVSPF ATDFKQLERL RDLLLTFVKE NERDFRPIID LNVSDFSTLD 300
301 SLKFTVTYYY KSNWQNVSLQ CVRRNKFMCA LKNAIATTNL PAVADPVRGS PDYPFVI
|
| Detection Method: | |
| Confidence: | 49.69897 |
| Match: | 2oauA |
| Description: | No description for 2oauA was found. |
| Term | Confidence | Notes |
| ion transmembrane transporter activity | 2.953242113316 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.6977929623745 | bayes_pls_golite062009 |
| gated channel activity | 2.26339914904933 | bayes_pls_golite062009 |
| ion channel activity | 2.23696248116611 | bayes_pls_golite062009 |
| substrate-specific channel activity | 2.14666448103271 | bayes_pls_golite062009 |
| channel activity | 2.13686688345078 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 2.13686688345078 | bayes_pls_golite062009 |
| binding | 1.54954691710605 | bayes_pls_golite062009 |
| transporter activity | 1.35148640692368 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.16179647485809 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.968340657063558 | bayes_pls_golite062009 |
| protein binding | 0.0993281469820123 | bayes_pls_golite062009 |
|
Region A: Residues: [669-763] |
1 11 21 31 41 51
| | | | | |
1 EQYNLERPEY SKTASRPQFS DISSTASSNS LSNKPGFAHS ESRNYHTHDE DNSSDDNHKR 60
61 EDRGHLPAQY LRQSVATWQI PNLISAIEAY DSQNE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [764-840] |
1 11 21 31 41 51
| | | | | |
1 SSQENATYTV VESNGNANGD NTATNSQGAT DNGQTTTNTT QNNVDNTQAT TDNTQANTDN 60
61 MQVAIDYSQN MDGQIQY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
