| Protein: | SPBC8D2.16c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 315 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC8D2.16c.
| Description | E-value | Query Range |
Subject Range |
|
|
432.0 | [0..11] | [315..68] |
|
|
431.0 | [0..11] | [315..129] |
|
|
423.0 | [0..10] | [315..68] |
|
|
420.0 | [0..2] | [315..59] |
|
|
379.0 | [0..11] | [314..69] |
|
Region A: Residues: [1-315] |
1 11 21 31 41 51
| | | | | |
1 MEKESEIQSL PPTRRYTISL ALPISSLNVA YNLQLKTSFV WKISRIVSLY GIDEIILLED 60
61 PEYVQNTQVH TLSSDAYLKD PTKFLTDLLC YFETPFFMRK ELFPLNPHLK YTSCFPLLPL 120
121 RNDKASTVNI EFPYREGIVT HPSPQAKNKY IINAGLSHNV IVSSPSVLAP RTRVTVRLKA 180
181 QSPNEEGQLQ GDIVSFSAPR EKGGHYWGYK VRSCLSSQLC KSSPYKGGYD FVVQINSQTS 240
241 AITSKELEAS LPSSFRHAVL VLQDNVVQKE LVDSTAKSIS FNPFPVSFLN DPIPEEILLA 300
301 AMTRLSDMLL MHGRR
|
| Detection Method: |  |
| Confidence: | 68.69897 |
| Match: | 1k3rA |
| Description: | Hypothetical protein MTH1 (MT0001), insert domain; Hypothetical protein MTH1 (MT0001), dimerisation domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA binding | 0.720818241344343 | bayes_pls_golite062009 |
| transferase activity | 0.688889531234865 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.380921013543347 | bayes_pls_golite062009 |
| structural molecule activity | 0.299226061385558 | bayes_pls_golite062009 |
| binding | 0.293817467887223 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.246383536367751 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.24178739108272 | bayes_pls_golite062009 |
| catalytic activity | 0.030872290848594 | bayes_pls_golite062009 |
