YRC Public Data Repository - Protein Structure Prediction

Protein:	SPCC14G10.01
Organism:	Schizosaccharomyces pombe
Length:	236 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC14G10.01.

Description	E-value	Query Range	Subject Range
CAB5_YEAST - Dephospho-CoA kinase CAB5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAB5 PE=1 SV=1 gi\|190404849 - gi\|190404849\|gb\|EDV08116.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi\|207346610 - gi\|207346610\|gb\|EDZ73059.1\| YDR196Cp-like protein [Saccharomyces cerevisiae AWRI1631] CAB5 - Probable dephospho-CoA kinase (DPCK) that catalyzes the last step in coenzyme A biosynthesis; null m...	181.0	[0..1]	[230..1]
gi\|49525519 - gi\|49525519\|emb\|CAG59136.1\| unnamed protein product [Candida glabrata] gi\|49525519, gi\|... - gi\|50287565\|ref\|XP_446212.1\| unnamed protein product [Candida glabrata], gi\|49525519\|emb\|CAG59136.1\|...	180.0	[0..1]	[231..1]
gi\|50307793, gi\|... - gi\|50307793\|ref\|XP_453890.1\| unnamed protein product [Kluyveromyces lactis], gi\|49643024\|emb\|CAH0098... gi\|49643024 - gi\|49643024\|emb\|CAH00986.1\| KLLA0D18711p [Kluyveromyces lactis]	175.0	[0..1]	[235..1]
gi\|50427023, gi\|... - gi\|50427023\|ref\|XP_462116.1\| hypothetical protein DEHA0G14179g [Debaryomyces hansenii CBS767], gi\|49...	173.0	[0..1]	[230..1]
gi\|46443856, gi\|... - gi\|68468148\|ref\|XP_721913.1\| hypothetical protein CaO19.4005 [Candida albicans SC5314], gi\|68467831\|... gi\|238882886 - gi\|238882886\|gb\|EEQ46524.1\| conserved hypothetical protein [Candida albicans WO-1] orf19.11488, orf... - orf19.4005 CGDID:CAL0004646 Assembly 19, Contig19-10194 (212776, 212051) CDS, reverse complemented, ...	173.0	[0..1]	[227..1]
gi\|44985757, gi\|... - gi\|45200987\|ref\|NP_986557.1\| AGL110Cp [Ashbya gossypii ATCC 10895], gi\|44985757\|gb\|AAS54381.1\| AGL11... gi\|44985757 - gi\|44985757\|gb\|AAS54381.1\| AGL110Cp [Ashbya gossypii ATCC 10895]	168.0	[0..1]	[228..1]
gi\|108870123, gi... - gi\|157135749\|ref\|XP_001663575.1\| hypothetical protein AaeL_AAEL013394 [Aedes aegypti], gi\|108870123\|...	167.0	[0..1]	[227..1]
gi\|157774403 - gi\|157774403\|ref\|XP_001665267.1\| hypothetical protein CBG10005 [Caenorhabditis briggsae AF16] gi\|39590766, gi\|... - gi\|39590766\|emb\|CAE65139.1\| Hypothetical protein CBG10005 [Caenorhabditis briggsae], gi\|187031460\|em...	163.0	[0..1]	[228..13]
gi\|115934484, gi... - gi\|72014803\|ref\|XP_782468.1\| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus], gi\|115...	163.0	[0..1]	[206..1]
gi\|49651086 - gi\|49651086\|emb\|CAG78023.1\| YALI0F09625p [Yarrowia lipolytica] gi\|49651086, gi\|... - gi\|50555616\|ref\|XP_505216.1\| YALI0F09625p [Yarrowia lipolytica], gi\|49651086\|emb\|CAG78023.1\| unnamed...	162.0	[0..1]	[231..1]

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Predicted Domain #1

Region A:
Residues: [1-236]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLILGLTGSI ATGKSTVSRE FQEKYHIKII DADVLARKVV EPNTPCLIKI QKEFGNEVLH  60
   61 EDGTLNRAKL GQAVFQDAGK RSLLNSIIHP AVRLEMLKEL LRCYVRGYSI VILDVPLLFE 120
  121 AKMQFICWKT ICVSCDKSIQ KQRLLARNPE LTAEDAENRV QAQMPLELKC QLADIVIENN 180
  181 SDLETLYENI HNVLPLITPS YFFTLLCLIL PPLQITLQVI AFVSQKKKVS EFRKHI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	35.69897
Match:	1vhlA
Description:	Crystal structure of dephospho-CoA kinase with adenosine-5'-diphosphate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
dephospho-CoA kinase activity	2.08198137437575	bayes_pls_golite062009
catalytic activity	1.00104173493322	bayes_pls_golite062009
nucleic acid binding	0.727912309521959	bayes_pls_golite062009
DNA binding	0.263924823205515	bayes_pls_golite062009
nucleoside-triphosphatase activity	0.0880086189831292	bayes_pls_golite062009
pyrophosphatase activity	0.0746809525189132	bayes_pls_golite062009
binding	0.0673679334754882	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	0.0557582578674931	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	0.0529869469040288	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: