| Protein: | SPBC17D1.07c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 962 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC17D1.07c.
| Description | E-value | Query Range |
Subject Range |
|
|
294.0 | [0..26] | [358..6] |
|
|
294.0 | [0..26] | [358..50] |
|
|
294.0 | [0..25] | [361..5] |
|
Region A: Residues: [1-218] |
1 11 21 31 41 51
| | | | | |
1 MKMLQNKGPL QELTLNAMAP NGIFQDEPMI QKFENHYVFK KDMKSKRNKE VKNQMNDWLA 60
61 YGYLCSVHEA KKWLEEETNN EYQNLDDFVD ALVNGKVLCQ LAFKYYPKLA SNWKPRYQIS 120
121 ERNTVYLNAF FHFLDFIGMF TPFRFETKDL VRRFNIPKVI YCLHALSYLL DFLEVTRHVP 180
181 SLYGKLRIKK SQLNTATKEI SLLKKAKKFP NFPKLKNF
|
| Detection Method: |  |
| Confidence: | 42.69897 |
| Match: | 1p5sA |
| Description: | STRUCTURE AND FUNCTION OF THE CALPONIN-HOMOLOGY DOMAIN OF AN IQGAP PROTEIN FROM SCHIZOSACCHAROMYCES POMBE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [219-356] |
1 11 21 31 41 51
| | | | | |
1 FCSYSHRHET ATSNKQVSCF REVPAWIKQC QSQCRGFLTR KCVSIEKLRR DDMSERLGWL 60
61 PKLETKLSSI SDEERLILLK ESHQIYRKMV SLHLELLHLP QLEMSLDFCG FSSDDSSIAI 120
121 SSQLVPPILN NLIFKLEE
|
| Detection Method: | |
| Confidence: | 38.30103 |
| Match: | 1f5xA |
| Description: | RhoGEF Vav |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [357-554] |
1 11 21 31 41 51
| | | | | |
1 SPQIWILIIS RFSSDGIDKI DVQNFILLIL KFFGFAISAS DRRSFLNLIM SCVMVSIQQS 60
61 SAEVGHSTSD SLISWASRLF TKGFWYAISF GVFSNCFSLQ LQSFFEKHLG NVVDKFFLEH 120
121 LCETTIESDA MRVVTEMLVS CYENRERIPN ELPMVLKQIY YSRSESFKPS AIKEFIEYFL 180
181 CDQLMNCLSV YYSKYFEG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [555-637] |
1 11 21 31 41 51
| | | | | |
1 KDSKKFTLVK HFMNSLFGRV KLNEQTEIIW HTRNYRIVEA LVRKLIHLST PKIIPVYGGR 60
61 TLSCTHKDIF DLQNILRYCD ERG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [638-827] |
1 11 21 31 41 51
| | | | | |
1 DFSSFPSFKK LISLLGSPKL FKKHENQILL LESKNEVIHS SLPCSKSSLY QLSLSLCIPL 60
61 IEGHLRNSLE EILFGVPTEL ENQKFMSVLR NDKLIKSIHP GSLSGISNSF VNSKHPIEQW 120
121 QSRLRKILHL FSGRNEDIAS LQCVLQFGSS ERIHLEDIQN SHRYLCSLKK NNSQKDIHRN 180
181 PLLSHVFDTN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [828-962] |
1 11 21 31 41 51
| | | | | |
1 TKSFDTLKTL NYKHAILKKS MGELYKMEMI HECPRQLFGQ ILVVYLNRER TLLNFYLIEN 60
61 SKTIDEATLQ LTDLIQAIKT GIYYLRMFNL PFHVKQLYTW LAPISKYDSE ISFNQKKERR 120
121 KTFLSFERRG KNRKF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
