| Protein: | SPBC17D1.07c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 962 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC17D1.07c.
| Description | E-value | Query Range |
Subject Range |
|
|
294.0 | [0..26] | [358..6] |
|
|
294.0 | [0..26] | [358..50] |
|
|
294.0 | [0..25] | [361..5] |
|
Region A: Residues: [1-218] |
1 11 21 31 41 51
| | | | | |
1 MKMLQNKGPL QELTLNAMAP NGIFQDEPMI QKFENHYVFK KDMKSKRNKE VKNQMNDWLA 60
61 YGYLCSVHEA KKWLEEETNN EYQNLDDFVD ALVNGKVLCQ LAFKYYPKLA SNWKPRYQIS 120
121 ERNTVYLNAF FHFLDFIGMF TPFRFETKDL VRRFNIPKVI YCLHALSYLL DFLEVTRHVP 180
181 SLYGKLRIKK SQLNTATKEI SLLKKAKKFP NFPKLKNF
|
| Detection Method: |  |
| Confidence: | 42.69897 |
| Match: | 1p5sA |
| Description: | STRUCTURE AND FUNCTION OF THE CALPONIN-HOMOLOGY DOMAIN OF AN IQGAP PROTEIN FROM SCHIZOSACCHAROMYCES POMBE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [219-356] |
1 11 21 31 41 51
| | | | | |
1 FCSYSHRHET ATSNKQVSCF REVPAWIKQC QSQCRGFLTR KCVSIEKLRR DDMSERLGWL 60
61 PKLETKLSSI SDEERLILLK ESHQIYRKMV SLHLELLHLP QLEMSLDFCG FSSDDSSIAI 120
121 SSQLVPPILN NLIFKLEE
|
| Detection Method: | |
| Confidence: | 38.30103 |
| Match: | 1f5xA |
| Description: | RhoGEF Vav |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [357-554] |
1 11 21 31 41 51
| | | | | |
1 SPQIWILIIS RFSSDGIDKI DVQNFILLIL KFFGFAISAS DRRSFLNLIM SCVMVSIQQS 60
61 SAEVGHSTSD SLISWASRLF TKGFWYAISF GVFSNCFSLQ LQSFFEKHLG NVVDKFFLEH 120
121 LCETTIESDA MRVVTEMLVS CYENRERIPN ELPMVLKQIY YSRSESFKPS AIKEFIEYFL 180
181 CDQLMNCLSV YYSKYFEG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [555-637] |
1 11 21 31 41 51
| | | | | |
1 KDSKKFTLVK HFMNSLFGRV KLNEQTEIIW HTRNYRIVEA LVRKLIHLST PKIIPVYGGR 60
61 TLSCTHKDIF DLQNILRYCD ERG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.691 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.690 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.663 | d.28.1 | Ribosomal protein S19 |
| View | Download | 0.661 | d.58.58 | Description not found. |
| View | Download | 0.638 | a.54.1 | Domain of early E2A DNA-binding protein, ADDBP |
| View | Download | 0.629 | d.58.58 | Description not found. |
| View | Download | 0.575 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.571 | d.68.3 | SirA-like |
| View | Download | 0.513 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.458 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.393 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.369 | d.58.48 | MTH1187-like |
| View | Download | 0.365 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [638-827] |
1 11 21 31 41 51
| | | | | |
1 DFSSFPSFKK LISLLGSPKL FKKHENQILL LESKNEVIHS SLPCSKSSLY QLSLSLCIPL 60
61 IEGHLRNSLE EILFGVPTEL ENQKFMSVLR NDKLIKSIHP GSLSGISNSF VNSKHPIEQW 120
121 QSRLRKILHL FSGRNEDIAS LQCVLQFGSS ERIHLEDIQN SHRYLCSLKK NNSQKDIHRN 180
181 PLLSHVFDTN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [828-962] |
1 11 21 31 41 51
| | | | | |
1 TKSFDTLKTL NYKHAILKKS MGELYKMEMI HECPRQLFGQ ILVVYLNRER TLLNFYLIEN 60
61 SKTIDEATLQ LTDLIQAIKT GIYYLRMFNL PFHVKQLYTW LAPISKYDSE ISFNQKKERR 120
121 KTFLSFERRG KNRKF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.629 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.627 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.624 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.619 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.578 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.554 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.543 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.506 | d.95.2 | Homing endonucleases |
| View | Download | 0.446 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.379 | a.118.1 | ARM repeat |
| View | Download | 0.316 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.257 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
