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Protein Overview: SPBC17D1.07c

General Information:
Name(s) found: SPBC17D1.07c [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • GTPase regulator [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 962 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: small GTPase mediated signal transduction [ISSLink to PubMed article]
    regulation of catalytic activity [ICLink to PubMed article]
    Molecular Function: calcium ion binding [ISSLink to PubMed article]
    GTPase regulator activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMLQNKGPL QELTLNAMAP NGIFQDEPMI QKFENHYVFK KDMKSKRNKE VKNQMNDWLA  60
   61 YGYLCSVHEA KKWLEEETNN EYQNLDDFVD ALVNGKVLCQ LAFKYYPKLA SNWKPRYQIS 120
  121 ERNTVYLNAF FHFLDFIGMF TPFRFETKDL VRRFNIPKVI YCLHALSYLL DFLEVTRHVP 180
  181 SLYGKLRIKK SQLNTATKEI SLLKKAKKFP NFPKLKNFFC SYSHRHETAT SNKQVSCFRE 240
  241 VPAWIKQCQS QCRGFLTRKC VSIEKLRRDD MSERLGWLPK LETKLSSISD EERLILLKES 300
  301 HQIYRKMVSL HLELLHLPQL EMSLDFCGFS SDDSSIAISS QLVPPILNNL IFKLEESPQI 360
  361 WILIISRFSS DGIDKIDVQN FILLILKFFG FAISASDRRS FLNLIMSCVM VSIQQSSAEV 420
  421 GHSTSDSLIS WASRLFTKGF WYAISFGVFS NCFSLQLQSF FEKHLGNVVD KFFLEHLCET 480
  481 TIESDAMRVV TEMLVSCYEN RERIPNELPM VLKQIYYSRS ESFKPSAIKE FIEYFLCDQL 540
  541 MNCLSVYYSK YFEGKDSKKF TLVKHFMNSL FGRVKLNEQT EIIWHTRNYR IVEALVRKLI 600
  601 HLSTPKIIPV YGGRTLSCTH KDIFDLQNIL RYCDERGDFS SFPSFKKLIS LLGSPKLFKK 660
  661 HENQILLLES KNEVIHSSLP CSKSSLYQLS LSLCIPLIEG HLRNSLEEIL FGVPTELENQ 720
  721 KFMSVLRNDK LIKSIHPGSL SGISNSFVNS KHPIEQWQSR LRKILHLFSG RNEDIASLQC 780
  781 VLQFGSSERI HLEDIQNSHR YLCSLKKNNS QKDIHRNPLL SHVFDTNTKS FDTLKTLNYK 840
  841 HAILKKSMGE LYKMEMIHEC PRQLFGQILV VYLNRERTLL NFYLIENSKT IDEATLQLTD 900
  901 LIQAIKTGIY YLRMFNLPFH VKQLYTWLAP ISKYDSEISF NQKKERRKTF LSFERRGKNR 960
  961 KF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..218] PSI-BLAST 42.69897 STRUCTURE AND FUNCTION OF THE CALPONIN-HOMOLOGY DOMAIN OF AN IQGAP PROTEIN FROM SCHIZOSACCHAROMYCES POMBE
    2 View Details [219..356] PSI-BLAST 38.30103 RhoGEF Vav
    3 View Details [357..554] deduced N/A No confident structure predictions are available.
    4 View Details [555..637] deduced N/A No confident structure predictions are available.
    5 View Details [638..827] deduced N/A No confident structure predictions are available.
    6 View Details [828..962] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle