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View Structure Prediction Details

Protein: SPAC16C9.05
Organism: Schizosaccharomyces pombe
Length: 404 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC16C9.05.

Description E-value Query
Range
Subject
Range
gi|167773753 - gi|167773753|gb|ABZ92311.1| PHD finger protein 15 [synthetic construct]
gi|119582658, gi... - gi|33871210|gb|AAH21962.2| PHF15 protein [Homo sapiens], gi|119582658|gb|EAW62254.1| PHD finger prot...
226.0 [0..7] [379..92]
gi|76683499 - gi|76683499|ref|XP_589814.2| PREDICTED: similar to PHD finger protein 15, partial [Bos taurus]
222.0 [0..7] [379..282]
gi|109078746 - gi|109078746|ref|XP_001102649.1| PREDICTED: similar to PHD finger protein 15 [Macaca mulatta]
221.0 [0..7] [379..92]
gi|114601894 - gi|114601894|ref|XP_517936.2| PREDICTED: PHD finger protein 15 [Pan troglodytes]
220.0 [0..7] [379..92]
gi|73970752 - gi|73970752|ref|XP_850716.1| PREDICTED: similar to PHD finger protein 15 isoform 2 [Canis familiaris...
220.0 [0..7] [379..90]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSINNSSQ PTVPSISNNS HGDSFVNEGP PSNFKNNSLT SSTHSSTDHV NVLPISQDKE  60
   61 MDISSPVKKQ KASYSNKSPN KAPIQKSRGS SLKS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HLETESQQTP VKRRRRKATI RNVDYCSACG GRGLFICCEG CPCSFHLSCL EPPLTPENIP  60
   61 EGSWFCVTCS IKSHHPPKHP L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.69897
Match: 2jm1A
Description: No description for 2jm1A was found.

Predicted Domain #3
Region A:
Residues: [176-404]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIWSQLYDWI DSQNPSQYRL PDDLVHYFHG ISRGDTGAYK ETEGEMDTDE FSALPTGSSI  60
   61 TNLAYCGYCS KPSMGACWVY GCQLCDTFYH KNCKEHAKKC SHDSIGKKGM RVPKNAVVIR 120
  121 TPLVLDTTSN TLNPKVMISG WQFLMGEFPS DELLYFPRLP VSCLYKVSED GLIKDFLYAI 180
  181 GIEAKKFNNE RKKRELEVIP PDVKSALLPA RTHPNLPIAL RTLFNKART

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.0
Match: 2f6jA
Description: No description for 2f6jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle