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View Structure Prediction Details

Protein: SPAC16C9.05
Organism: Schizosaccharomyces pombe
Length: 404 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC16C9.05.

Description E-value Query
Range
Subject
Range
gi|167773753 - gi|167773753|gb|ABZ92311.1| PHD finger protein 15 [synthetic construct]
gi|119582658, gi... - gi|33871210|gb|AAH21962.2| PHF15 protein [Homo sapiens], gi|119582658|gb|EAW62254.1| PHD finger prot...
226.0 [0..7] [379..92]
gi|76683499 - gi|76683499|ref|XP_589814.2| PREDICTED: similar to PHD finger protein 15, partial [Bos taurus]
222.0 [0..7] [379..282]
gi|109078746 - gi|109078746|ref|XP_001102649.1| PREDICTED: similar to PHD finger protein 15 [Macaca mulatta]
221.0 [0..7] [379..92]
gi|114601894 - gi|114601894|ref|XP_517936.2| PREDICTED: PHD finger protein 15 [Pan troglodytes]
220.0 [0..7] [379..92]
gi|73970752 - gi|73970752|ref|XP_850716.1| PREDICTED: similar to PHD finger protein 15 isoform 2 [Canis familiaris...
220.0 [0..7] [379..90]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSINNSSQ PTVPSISNNS HGDSFVNEGP PSNFKNNSLT SSTHSSTDHV NVLPISQDKE  60
   61 MDISSPVKKQ KASYSNKSPN KAPIQKSRGS SLKS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HLETESQQTP VKRRRRKATI RNVDYCSACG GRGLFICCEG CPCSFHLSCL EPPLTPENIP  60
   61 EGSWFCVTCS IKSHHPPKHP L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.69897
Match: 2jm1A
Description: No description for 2jm1A was found.

Predicted Domain #3
Region A:
Residues: [176-404]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIWSQLYDWI DSQNPSQYRL PDDLVHYFHG ISRGDTGAYK ETEGEMDTDE FSALPTGSSI  60
   61 TNLAYCGYCS KPSMGACWVY GCQLCDTFYH KNCKEHAKKC SHDSIGKKGM RVPKNAVVIR 120
  121 TPLVLDTTSN TLNPKVMISG WQFLMGEFPS DELLYFPRLP VSCLYKVSED GLIKDFLYAI 180
  181 GIEAKKFNNE RKKRELEVIP PDVKSALLPA RTHPNLPIAL RTLFNKART

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.0
Match: 2f6jA
Description: No description for 2f6jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle