| Protein: | tfb1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 477 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tfb1.
| Description | E-value | Query Range |
Subject Range |
|
|
456.0 | [0..2] | [471..63] |
|
|
456.0 | [0..2] | [471..63] |
|
|
454.0 | [0..2] | [471..63] |
|
|
454.0 | [0..2] | [449..63] |
|
|
452.0 | [0..2] | [471..63] |
|
|
450.0 | [0..2] | [471..37] |
|
|
443.0 | [0..2] | [471..63] |
|
Region A: Residues: [1-60] |
1 11 21 31 41 51
| | | | | |
1 MIRVFIVVKE GEDPTSLVFH FTGTPNAREN CDMITNELRN AIQRQREGSQ SKPQGANVDR 60
61
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [61-123] |
1 11 21 31 41 51
| | | | | |
1 VNSTNLEKDI DLQESLLTNN PDLLQTFKEA VMKGHLSNEQ FWSTRLHLLR AHAVERSQQR 60
61 GPY
|
| Detection Method: | |
| Confidence: | 12.154902 |
| Match: | 2diiA |
| Description: | No description for 2diiA was found. |
|
Region A: Residues: [124-190] |
1 11 21 31 41 51
| | | | | |
1 NVLSTIKPKT VDNQMKVSLT GQQIHDMFEQ HPLLRKVYDK HVPPLAEGEF WSRFFLSKLC 60
61 KKLRGDR
|
| Detection Method: | |
| Confidence: | 1.74 |
| Match: | 1x3aA |
| Description: | Solution structure of the BSD domain of human Synapse associated protein 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [191-267] |
1 11 21 31 41 51
| | | | | |
1 ITPMDPSDDI MDKYLKDNEE VTKVSDEPIA SHLFDLEGND QNANVIAELR PDITMRIDKE 60
61 ALPFMKNINQ LSERLLE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [268-477] |
1 11 21 31 41 51
| | | | | |
1 KSLGNSKRFN NENEETYLKE SGFHDLEEEA SDSKVVLKIK GQDQLLENNF VPSKNQVGLE 60
61 PLPSLEALQH LYQEDSISLN HIEHDSDSLA EAAMQLTQSM REKHEFETHG TASNLPIDIK 120
121 NEIVLCHTVT IEFLHQFWNA LLNTTFPDKK AMAPLQNALL NSKKRVEAIA SQAQEQNVDP 180
181 KLVYELVSCT LTSIDTSISE YQRRMSYPPA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.960 | 0.011 | transcription initiation from RNA polymerase II promoter | a.63.1 | Apolipophorin-III |
