| Protein: | srb4 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 545 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srb4.
| Description | E-value | Query Range |
Subject Range |
|
|
461.0 | [0..1] | [367..7] |
|
|
430.0 | [0..10] | [431..1] |
|
|
423.0 | [0..14] | [356..20] |
|
|
388.0 | [0..34] | [366..82] |
|
|
388.0 | [0..13] | [361..7] |
|
|
354.0 | [0..34] | [362..99] |
|
|
328.0 | [0..12] | [446..4] |
|
|
327.0 | [0..10] | [431..1] |
|
|
325.0 | [0..15] | [436..5] |
|
Region A: Residues: [1-289] |
1 11 21 31 41 51
| | | | | |
1 MAEEANKDAD ISSLSLSLDP EIIGGQNNFL ENNLQQIFQK IIQERGPFRD LKEEDLQKEL 60
61 QKESIKDESS AKSSETENVL EFATLDSKRN VNDTEVESMD SQAYKKELIE QIMIAQTECS 120
121 LALDMTSLLL SKFKENSIET ISPFLKSTVP PSSLQFSRSQ PPESKESDAT LAKCWKEKSL 180
181 TSSCKFLFEA KERLTSVVET EHEYYTELVK VKEASWPLFN SQGSNHLSVQ YSCLGGISLG 240
241 LGLIRMKPES KSFEVQSSLL YSQAALKISI LNKDRDEIGS STWSWPSQN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [290-368] |
1 11 21 31 41 51
| | | | | |
1 CNSVLLKDIY KLQEILFEMD IWNSLLQEAQ SCGNQGVNFT GDEILVPISD DHVVRITLET 60
61 SSKNTESGFT EDKKSNEDT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.365 | 0.826 | regulation of transcription, DNA-dependent | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.363 | 0.001 | molecular_function | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.432 | 0.001 | molecular_function | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.431 | N/A | N/A | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.368 | N/A | N/A | d.31.1 | Cdc48 domain 2-like |
|
Region A: Residues: [369-545] |
1 11 21 31 41 51
| | | | | |
1 STNFVTIKQE KELLKCLCDT LNAIAHILFL KHCRKSDRRS QQPELYMAID ANAPLILRPL 60
61 IFYYNLNQES LEFQRWLKQR DISFKFMPNY PWEKAKDFLE LENSLSINRL SISWRIMVSN 120
121 FEPAIFIQHT PTLHGTDKSV WRCKDQYSSN QFSSLKNVCQ YIEHHINSLS RRSKKTE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
