| Protein: | scr1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 565 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for scr1.
| Description | E-value | Query Range |
Subject Range |
|
|
483.0 | [0..2] | [386..410] |
|
|
478.0 | [0..2] | [379..2524] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MSEATTATTT GKPSRSTKNP DAPRPYKCPL CTKAFYRLEH QTRHIRTHTG EKPHVCTFPG 60
61 CAKRFSRSDE LTRHARIHTN ANSRRNAAAA AAANNSARSS NSPAGNLEPS TNNAGVHMTN 120
121 ASMNPNVNPS YPVFIPQVGM SVAPPVATAA VSMSYPHHYS ASVQ
|
| Detection Method: |  |
| Confidence: | 26.154902 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.72893576328611 | bayes_pls_golite062009 |
| nucleic acid binding | 1.69485293197742 | bayes_pls_golite062009 |
| DNA binding | 1.56529962350735 | bayes_pls_golite062009 |
| transcription regulator activity | 1.34618935906821 | bayes_pls_golite062009 |
| transcription factor activity | 0.482168429405299 | bayes_pls_golite062009 |
|
Region A: Residues: [165-365] |
1 11 21 31 41 51
| | | | | |
1 QQQATFVSNG QPHNLPAQAQ PATIYGIPDA LHTTQNGTTI HVTGTPPGAV SQRSEPDSRL 60
61 SSMNEMQLLA SAAANQLDAA PRITPTKSSG VNLMPLSNAP SPPKQMNVVG SLPSSSNTSP 120
121 NHLASVPNRG LTSNSSTGSF TKYTNGSSNS LYSNSSMQTP YLPSKSNSST SLHSMYGVGT 180
181 TAYAPQSLRY AHYNYLPYSR P
|
| Detection Method: | |
| Confidence: | 45.30103 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [366-565] |
1 11 21 31 41 51
| | | | | |
1 SVSNGFDDDS SSSDFAHFRY QRRSRPVSPC STAPSSPTFS TRSFSPTPDV TPLVTPAHSP 60
61 RLRPMDDPSC VQLPSIRSLS LRPSQVPLIP PLKCDPNAFS ASTPASGAVS RTPSSVSLSS 120
121 LSNVNSSMPH KPASQSNVGP VRISSNRRSR KFSSSSRVSV SNLLAGSPPS PSSSTKSASS 180
181 SYSTTTPAFS IGPLTPMTKP
|
| Detection Method: | |
| Confidence: | 1.13 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
