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View Structure Prediction Details

Protein: SPBC23E6.06c
Organism: Schizosaccharomyces pombe
Length: 204 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC23E6.06c.

Description E-value Query
Range
Subject
Range
RIBAB_AQUAE, RIB... - Riboflavin biosynthesis protein ribBA OS=Aquifex aeolicus GN=ribBA PE=3 SV=1, Riboflavin biosynthesi...
RIBBA_AQUAE - Riboflavin biosynthesis protein RibBA OS=Aquifex aeolicus (strain VF5) GN=ribBA PE=3 SV=1
361.0 [0..2] [203..9]
gi|220931844, gi... - gi|89210620|ref|ZP_01189007.1| 3,4-Dihydroxy-2-butanone 4-phosphate synthase:GTP cyclohydrolase II [...
346.0 [0..2] [203..1]
gi|78043761, gi|... - gi|78043761|ref|YP_360305.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II [Ca...
343.0 [0..2] [202..3]
gi|119766655, gi... - gi|68546848|ref|ZP_00586392.1| 3,4-Dihydroxy-2-butanone 4-phosphate synthase [Shewanella amazonensis...
343.0 [0..2] [200..3]
gi|125972630, gi... - gi|67874098|ref|ZP_00504003.1| 3,4-Dihydroxy-2-butanone 4-phosphate synthase:GTP cyclohydrolase II [...
gi|196199353, gi... - gi|196251390|ref|ZP_03150060.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase [Clostridium thermocel...
343.0 [0..2] [201..3]
RIBBA_SYNY3 - Riboflavin biosynthesis protein RibBA OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ribBA PE=3 ...
gi|7428281 - pir||S75629 GTP cyclohydrolase II (EC 3.5.4.25) / 3, 4-dihydroxy-2-butanone 4-phosphate synthase (EC...
GCH2_SYNY3, RIBA... - Riboflavin biosynthesis protein ribBA OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / N-1) GN=r...
342.0 [0..1] [200..1]
gi|56750133, gi|... - gi|56750133|ref|YP_170834.1| bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohyd...
342.0 [0..2] [200..9]
gi|17132669, gi|... - gi|17231028|ref|NP_487576.1| bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohyd...
gi|25290330 - pir||AI2247 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase [imported] - Nosto...
341.0 [0..1] [200..37]
gi|33861450, gi|... - gi|33861450|ref|NP_893011.1| bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohyd...
341.0 [0..2] [200..24]
gi|81300241, gi|... - gi|81300241|ref|YP_400449.1| bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohyd...
341.0 [0..2] [200..9]

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Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLASIEEAVN DFRDGKFLIV LDDETRENEG DLIIAGCKVT TEQMAFLVRH SSGYVCVPMT  60
   61 GERLDSLEIP MMVDNNEDRM RTAYAVTLDY ANGTTTGISA HDRALTTRQL ANPEVTSPRE 120
  121 FNRPGHIVPL RARDGGVLER DGHTEAAVDL CKLAGLPPVG AICELVREED GLMSRFDDCI 180
  181 SFGKKWGIKV ITIESLKSYI KGRM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.154902
Match: 1tksA
Description: Crystal structure of 3,4-Dihydroxy-2-butanone 4-phosphate Synthase of Candida albicans
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
3,4-dihydroxy-2-butanone-4-phosphate synthase activity 7.56167968780416 bayes_pls_golite062009
GTP cyclohydrolase activity 2.51581618679202 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.92717548101547 bayes_pls_golite062009
cyclohydrolase activity 1.48770406828775 bayes_pls_golite062009
binding 1.05088380360844 bayes_pls_golite062009
nucleic acid binding 0.637633326908211 bayes_pls_golite062009
catalytic activity 0.343636936190038 bayes_pls_golite062009
protein binding 0.291469273637145 bayes_pls_golite062009
DNA binding 0.21448652890147 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle