| Protein: | rga3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 969 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rga3.
| Description | E-value | Query Range |
Subject Range |
|
|
406.0 | [0..2] | [338..2533] |
|
|
395.0 | [0..2] | [534..710] |
|
|
389.0 | [0..4] | [504..253] |
|
|
387.0 | [0..2] | [611..395] |
|
Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MIFRKSISKS PSSKGSTVCF RCGQAFQRRE TPISFGGHMW HKDCFCCTKC DKGLEHSDQM 60
61 LVQTSDGRPV CSSCAHTCTA CRMRIKDYAL MSGYDSYHRE CFRCHDCRKQ IIDSNFKRDN 120
121 RTIFCNDCKQ VRHPSRSSDE SADYHNFEVD VTIKP
|
| Detection Method: |  |
| Confidence: | 39.0 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [156-448] |
1 11 21 31 41 51
| | | | | |
1 TETKSSVESN KSLSIEIMSP QKPPLSPFGG SRDRLVSETP TNMSQAEGGN VPNDGQDSNL 60
61 ASNSADSLLP SAKNRSFSSF TSFESPMKYD DSFFPISPSI SPLQKVNKQQ QIESPTATFP 120
121 LSKNTWKNRF HTFHKQSFTP VNDSSSSDSL KPTINEEALD DFAGSASPYK TMSLTDRAEP 180
181 IVMNGHMRSL HNATSPFRPF SPSYRSSDTH SPRTRSPNVQ THKKTSSQPS DLSSFAQLLS 240
241 PPQVLSPKPN GGGHKSFRHS HSLSETSQQT LVPSLGSNGE YHLPTNDHSS TPA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [449-969] |
1 11 21 31 41 51
| | | | | |
1 QSERDSDVEE LREQLENLTA LTKKLSERLS SSTFDNSKFI RTEDKDTVRS AKLEICEKFF 60
61 SFADVTDDPT LKDPKHQDLV AAANAYMAML RESYGTEINN LLERRNELLD DYNNVQKILN 120
121 ESLEASVHLN TKNLELADLN NNLVKQIQHR VPPENQSNLE HTITTSSKNT TSSINPLTAV 180
181 SSNSGQSSGR PGPLSPNLNV TTRIDIKGKK GSMHLQPRDV NRKVPFKSMH TKSKSADPVV 240
241 GNEDRTQCDH VFHVNAIFKP SRCYICSESV WGSELRCFHC SISCHSRCLK RLFAESEHEK 300
301 TMSETVSENS KWMPEMPTRM PPPGPSPTMF GRSLENQLKI EGSVLPQVIA MCVSCVDAHG 360
361 LEVEGIYRIS GSASQVRVLV DEFENGSIRM EHLTSDLFAC TSVLKTYLHR LPEPVIPGTQ 420
421 YEELLEAEKI EKEEEKIERV VEVMKTLHPA HLSVFRFLIA HLGRVCKHAE KNLMNSKNVS 480
481 TVFAPTLMRD KVNRFDLQHA TKKSTALQFM LDNVDKILHN L
|
| Detection Method: | |
| Confidence: | 78.522879 |
| Match: | 1xa6A |
| Description: | Crystal Structure of the Human Beta2-Chimaerin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| Rho GTPase activator activity | 4.58620967349979 | bayes_pls_golite062009 |
| Rac GTPase activator activity | 4.48279904625182 | bayes_pls_golite062009 |
| GTPase regulator activity | 2.70614727793157 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 2.68579854252375 | bayes_pls_golite062009 |
| binding | 2.15139804299723 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 2.06038764955701 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.9750017471254 | bayes_pls_golite062009 |
| small GTPase regulator activity | 1.95738547986197 | bayes_pls_golite062009 |
| molecular adaptor activity | 1.33740973673697 | bayes_pls_golite062009 |
| protein binding | 1.29100556128076 | bayes_pls_golite062009 |
| SH3/SH2 adaptor activity | 1.2323381312171 | bayes_pls_golite062009 |
| Ras GTPase activator activity | 1.09070479183477 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.08705453507613 | bayes_pls_golite062009 |
| diacylglycerol binding | 1.02792245495259 | bayes_pls_golite062009 |
| Rho guanyl-nucleotide exchange factor activity | 0.967362611034944 | bayes_pls_golite062009 |
| Ras guanyl-nucleotide exchange factor activity | 0.958295643211986 | bayes_pls_golite062009 |
| protein binding, bridging | 0.83823250804321 | bayes_pls_golite062009 |
| GTPase activator activity | 0.717730683557543 | bayes_pls_golite062009 |
| actin binding | 0.542172162219949 | bayes_pls_golite062009 |
| enzyme activator activity | 0.298334474872045 | bayes_pls_golite062009 |
| phosphoprotein binding | 0.16798254471727 | bayes_pls_golite062009 |
| Rho GTPase binding | 0.150587174126097 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0455432286632499 | bayes_pls_golite062009 |
