| Protein: | rap1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 693 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rap1.
| Description | E-value | Query Range |
Subject Range |
|
|
1226.0 | [0..82] | [693..1] |
|
|
59.0 | [0..87] | [302..68] |
|
Region A: Residues: [1-176] |
1 11 21 31 41 51
| | | | | |
1 MSFTFTKSDG SSILFAVSKN FEHIRGFKNA IDCFKGKIEF LSFDKVDPTK HDYYLVAEDE 60
61 RVSDLDIPKG FFERNPEFRH KMLKIAWITQ CIEQGKLLPT ESFEVELNQD DVNRTHDGFR 120
121 KRELFTLEDE KILIDHVHKN DINRFGTKVY EELARKYPQH SLESWRQHYK YMKKRL
|
| Detection Method: |  |
| Confidence: | 1.22 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [177-316] |
1 11 21 31 41 51
| | | | | |
1 PPVSDSDESN YCQRIIVKPY SSQKDYTQST HEQTLSSPIS KSASVSKSEN KALVNNKRYS 60
61 DSYFYFSKMR RISIDVDYVD EDLNLINAYL SQFGKKRSLN ELCALLSRRF SNRHTFSEWR 120
121 ALFMHFFPFI NSEGVDPAIL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [317-433] |
1 11 21 31 41 51
| | | | | |
1 SDRETSAMLD ETSDNEVADI DDQMIERKYL FSASEPNTVK STNRLIFSER KAYAADDSID 60
61 NTPSKVPIVN SLSDPRTNRP FFYSNPDSMY RSISNPLHLV DSQHLSPLNR KTHFNNP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [434-496] |
1 11 21 31 41 51
| | | | | |
1 IGQPQFTCLD DHEKTLRETS FRSLDDMSLR KSNSDNIFVK PGEDLEIPLL SDYSDSENIS 60
61 EKS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [497-597] |
1 11 21 31 41 51
| | | | | |
1 SDDEEAFEKQ VTSSYSSPIK VKSQGKSSKG SSGLDVREHE GSDDDAEVFV DRSPESFGAT 60
61 KVAHTSLEGN AASHKKVEEN MQQPVTKKQK KYRMVNEEAH T
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [598-693] |
1 11 21 31 41 51
| | | | | |
1 GPTIIIPSDN NEKVTTLPAG HVPSEEKGKF INLAMHELQN EVSILRSSVN HREVDEAIDN 60
61 ILRYTNSTEQ QFLEAMESTG GRVRIAIAKL LSKQTS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
