| Protein: | rad22 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 469 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rad22.
| Description | E-value | Query Range |
Subject Range |
|
|
468.0 | [0..1] | [469..1] |
|
|
316.0 | [0..20] | [457..62] |
|
|
313.0 | [0..4] | [467..78] |
|
|
296.0 | [0..18] | [317..29] |
|
|
296.0 | [0..18] | [305..29] |
|
|
295.0 | [0..18] | [203..28] |
|
|
295.0 | [0..4] | [467..6] |
|
|
287.0 | [0..18] | [249..28] |
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 MSFEQKQHVA SEDQGHFNTA YSHEEFNFLQ SSLTRKLGPE YVSRRSGPGG FSVSYIESWK 60
61 AIELANEIFG FNGWSSSIRS INVDFMDENK ENGRISLGLS VIVRVTIKDG AYHEDIGYGS 120
121 IDNCRGKASA FEKCKKEGTT DALKRALRNF GNSLGNCMYD KYYLREVGKM KPPTYHFDSG 180
181 DLFRKTDPAA RESFIKKQKT LNS
|
| Detection Method: |  |
| Confidence: | 80.0 |
| Match: | 1kn0A |
| Description: | The homologous-pairing domain of Rad52 recombinase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.14765341131293 | bayes_pls_golite062009 |
| nucleic acid binding | 3.0351747710117 | bayes_pls_golite062009 |
| RNA binding | 1.51047378734681 | bayes_pls_golite062009 |
| protein binding | 1.45612186272752 | bayes_pls_golite062009 |
| DNA binding | 1.36164279504822 | bayes_pls_golite062009 |
| transcription regulator activity | 1.01871957569312 | bayes_pls_golite062009 |
| double-stranded RNA binding | 0.486416546047936 | bayes_pls_golite062009 |
| transcription factor activity | 0.1846534408189 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.109630981204183 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.0240483444006283 | bayes_pls_golite062009 |
|
Region A: Residues: [204-322] |
1 11 21 31 41 51
| | | | | |
1 TRTVNNQPLV NKGEQLAPRR AAELNDEQTR EIEMYADEEL DNIFVEDDII AHLAVAEDTA 60
61 HPAANNHHSE KAGTQINNKD KGSHNSAKPV QRSHTYPVAV PQNTSDSVGN AVTDTSPKT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [323-469] |
1 11 21 31 41 51
| | | | | |
1 LFDPLKPNTG TPSPKFISAR AAAAAEGVVS APFTNNFNPR LDSPSIRKTS IIDHSKSLPV 60
61 QRASVLPIIK QSSQTSPVSN NSMIRDSESI INERKENIGL IGVKRSLHDS TTSHNKSDLM 120
121 RTNSDPQSAM RSRENYDATV DKKAKKG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
