| Protein: | ogm4 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 778 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ogm4.
| Description | E-value | Query Range |
Subject Range |
|
|
736.0 | [0..44] | [772..57] |
|
|
715.0 | [0..14] | [776..2] |
|
|
704.0 | [0..1] | [772..1] |
|
|
695.0 | [0..1] | [771..1] |
|
|
693.0 | [0..44] | [772..58] |
|
|
693.0 | [0..16] | [776..2] |
|
|
680.0 | [0..15] | [776..2] |
|
Region A: Residues: [1-60] |
1 11 21 31 41 51
| | | | | |
1 MASKSEKAVK KAQKLSKEPS VELTDTKSSD NVTPKQKSPN STEEDVSLNL KTLKAKKFKL 60
61
|
| Detection Method: |  |
| Confidence: | 0.98 |
| Match: | 4hb1A |
| Description: | A DESIGNED FOUR HELIX BUNDLE PROTEIN. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [61-124] |
1 11 21 31 41 51
| | | | | |
1 AFVLITVLSF ITRFWNLNLP GEVVFDEVHF GKFASYYLQG KYFFDLHPPF AKLLLALVAK 60
61 LAGY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [125-316] |
1 11 21 31 41 51
| | | | | |
1 DGHYLFDNIG DNYKDNGVPY VTIRAWPALL SSLVPPVVFL IMKESGYDLL ACIVSSSLVL 60
61 FDNAHVTEGR LILLDATLLF SMVCAIYCYV RFFKLRHTPF SRPWWAWLFF TGFFLSCTIS 120
121 TKYVGFFTFL SIGLSVCLEL WYLWDIKTGL TVERFFQHFL ARFFCLIFFP FLFFLFWFYM 180
181 HFNILTISGP GD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [317-545] |
1 11 21 31 41 51
| | | | | |
1 SFMSLEFQET LSDNPITANS TILNYYDIVT IKHMGTNAFL HSHPEKYPIP YDDGRISSGG 60
61 QQVTGYQFDD ENNYWMILPA DHYDPPIEAK LNVPVKNMDY IKLHHVGTNT DLMTHDVASP 120
121 YHPTNEEFTT VSVDESAGKK HEYTLFQVVM SDNTDPQRPL YTKASSFKLI HKLTHVAMWS 180
181 DPKPLPDWAF KQLEINGAKN IQTGSIFWTF DDIIGLKDSR LKKEKKIPK
|
| Detection Method: | |
| Confidence: | 50.09691 |
| Match: | 1t9fA |
| Description: | Structural genomics of Caenorhabditis elegans: Structure of a protein with unknown function |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| dolichyl-phosphate-mannose-protein mannosyltransferase activity | 7.33543412640964 | bayes_pls_golite062009 |
| mannosyltransferase activity | 6.32966341675541 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 2.60661923349025 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 2.57555885876017 | bayes_pls_golite062009 |
| receptor activity | 1.99332745476324 | bayes_pls_golite062009 |
| binding | 1.86366637427031 | bayes_pls_golite062009 |
| molecular transducer activity | 1.71523634580131 | bayes_pls_golite062009 |
| signal transducer activity | 1.71523634580131 | bayes_pls_golite062009 |
| cation channel activity | 1.66500687404195 | bayes_pls_golite062009 |
| ion channel activity | 1.61859406934521 | bayes_pls_golite062009 |
| substrate-specific channel activity | 1.57127083095499 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 1.55374970486978 | bayes_pls_golite062009 |
| channel activity | 1.55374970486978 | bayes_pls_golite062009 |
| inositol-1,4,5-trisphosphate receptor activity | 1.28298370923705 | bayes_pls_golite062009 |
| transferase activity | 0.981084601370981 | bayes_pls_golite062009 |
| calcium channel activity | 0.85901349040585 | bayes_pls_golite062009 |
| catalytic activity | 0.659936859803906 | bayes_pls_golite062009 |
| calcium-release channel activity | 0.65133561512386 | bayes_pls_golite062009 |
| gated channel activity | 0.53737429019655 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.52162184692236 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.52162184692236 | bayes_pls_golite062009 |
| protein binding | 0.405144403982597 | bayes_pls_golite062009 |
| inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity | 0.152598505509111 | bayes_pls_golite062009 |
|
Region A: Residues: [546-643] |
1 11 21 31 41 51
| | | | | |
1 KLPFWKKYLE LQLTMFRQNN MLTEFHPYSS NPSDWFTLHH GIAFWAKSEE NKQIYLLGNP 60
61 IGWWIIAGTV LSTTVVAAAE ILLRQRGIRT LPETVRNH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [644-778] |
1 11 21 31 41 51
| | | | | |
1 FYRSTMFFYM TYVFHYLPFF IMGRQLFLHH YLPAHLAGSL LVGAFIQLAC RKSFRSPVSA 60
61 GVPIPKDVDE KGHSKCHRKY GHVIELICTL LLIFVVIYCF TFFAPMTYGD KSLSVDEWTR 120
121 RKWLDSWVFQ YQKQN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
