| Protein: | mcs4 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 522 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mcs4.
| Description | E-value | Query Range |
Subject Range |
|
|
205.0 | [0..13] | [513..461] |
|
|
205.0 | [0..8] | [516..639] |
|
|
202.0 | [0..11] | [507..949] |
|
|
199.0 | [0..14] | [516..526] |
|
|
197.0 | [0..13] | [516..372] |
|
|
196.0 | [0..14] | [505..976] |
|
|
196.0 | [0..12] | [516..395] |
|
|
196.0 | [0..13] | [504..951] |
|
|
196.0 | [0..15] | [507..4] |
|
|
196.0 | [0..10] | [521..918] |
|
Region A: Residues: [1-167] |
1 11 21 31 41 51
| | | | | |
1 MRIWFKKVPD GITSSVILSE DHLVDDLKDA IARKFPIRIS QYYDAPELSI RVVAPPNASS 60
61 ELQSRELSPN ESILFVMETY YPHGQDFNDA LLVASPDTSV ALRYRSSQLS SSTFESTPPV 120
121 FSEYPPNIIP TPANETVPRI KQPSIALDSL ESPVSAPSRH QSTYSYK
|
| Detection Method: |  |
| Confidence: | 18.39794 |
| Match: | 2c2aA |
| Description: | Structure of the entire cytoplasmic portion of a sensor histidine kinase protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [168-358] |
1 11 21 31 41 51
| | | | | |
1 GGPLNYNLRN ASRTRSHQTL PSSNVNKTGV LLLPRSSRQQ TLASRPSLPD LTSADKSQPS 60
61 DEAESITRKN SIGMSTRSDE STAEKLAKAE VATPTNSRSI SHSSLYTKQS GTAGVLPAVN 120
121 ADIDAANRMN PDISSQFPIA DNKDPLNADT QAHLGFPSNQ IDGIVGTSPV NVLTSPGIGA 180
181 KAPFASLLEG V
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1id0A |
| Description: | Histidine kinase PhoQ domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein histidine kinase activity | 4.0801989106171 | bayes_pls_golite062009 |
| two-component sensor activity | 4.05766575937763 | bayes_pls_golite062009 |
| phosphotransferase activity, nitrogenous group as acceptor | 3.930740609705 | bayes_pls_golite062009 |
| two-component response regulator activity | 2.85609250646642 | bayes_pls_golite062009 |
| protein kinase activity | 2.71279142145028 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 2.59313186060787 | bayes_pls_golite062009 |
| kinase activity | 2.55431033782624 | bayes_pls_golite062009 |
| signal transducer activity | 2.54232469259941 | bayes_pls_golite062009 |
| molecular transducer activity | 2.54232469259941 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 2.23056987198541 | bayes_pls_golite062009 |
| transferase activity | 0.874054982954178 | bayes_pls_golite062009 |
| binding | 0.861888986648473 | bayes_pls_golite062009 |
| catalytic activity | 0.441963165592665 | bayes_pls_golite062009 |
| transcription regulator activity | 0.363939486794255 | bayes_pls_golite062009 |
| DNA binding | 0.131651654214685 | bayes_pls_golite062009 |
| nucleic acid binding | 0.040936017783927 | bayes_pls_golite062009 |
|
Region A: Residues: [359-522] |
1 11 21 31 41 51
| | | | | |
1 IPPINVLIVE DNIINQKILE TFMKKRNISS EVAKDGLEAL EKWKKKSFHL ILMDIQLPTM 60
61 SGIEVTQEIR RLERLNAIGV GAPKLTQPIP EKDQLNENKF QSPVIIVALT ASSLMADRNE 120
121 ALAAGCNDFL TKPVSLVWLE KKITEWGCMQ ALIDWNGWCR FRGR
|
| Detection Method: | |
| Confidence: | 28.0 |
| Match: | 1mvoA |
| Description: | PhoP receiver domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| two-component response regulator activity | 6.41182973389827 | bayes_pls_golite062009 |
| signal transducer activity | 4.14222417297698 | bayes_pls_golite062009 |
| molecular transducer activity | 4.14222417297698 | bayes_pls_golite062009 |
| transcription regulator activity | 3.97203966078014 | bayes_pls_golite062009 |
| binding | 1.92400975854452 | bayes_pls_golite062009 |
| DNA binding | 1.81181471191047 | bayes_pls_golite062009 |
| nucleic acid binding | 1.67707797730057 | bayes_pls_golite062009 |
| protein histidine kinase activity | 1.60632989169905 | bayes_pls_golite062009 |
| two-component sensor activity | 1.58303578136745 | bayes_pls_golite062009 |
| phosphotransferase activity, nitrogenous group as acceptor | 1.45748315828993 | bayes_pls_golite062009 |
| transcription factor activity | 1.19022093158713 | bayes_pls_golite062009 |
| protein kinase activity | 0.144846352298346 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.0408032640298051 | bayes_pls_golite062009 |
