| Protein: | gpi1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 653 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gpi1.
| Description | E-value | Query Range |
Subject Range |
|
|
772.0 | [0..17] | [644..986] |
|
|
770.0 | [0..17] | [642..147] |
|
|
768.0 | [0..17] | [649..7] |
|
|
767.0 | [0..17] | [649..9] |
|
|
762.0 | [0..17] | [642..85] |
|
|
740.0 | [0..17] | [644..9] |
|
|
697.0 | [0..17] | [641..157] |
|
|
690.0 | [0..54] | [649..43] |
|
|
689.0 | [0..17] | [644..9] |
|
|
674.0 | [0..137] | [653..1] |
|
Region A: Residues: [1-113] |
1 11 21 31 41 51
| | | | | |
1 MSTTTMNIAS APIEVKRIYW PKSTISYTDS GYLVGWKYST NDLIVVTTIT SYQSFANFLV 60
61 DYCKNQDQSV DIKSLCILGT FNCSADILPG DKYEIDCWIK VQQSTELSHP RVF
|
| Detection Method: |  |
| Confidence: | 1.0 |
| Match: | 1x5yA |
| Description: | Solution structure of the fibronectin type-III domain of mouse myosin-binding protein C, Fast-type homolog |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 2.00723005216019 | bayes_pls_golite062009 |
| binding | 1.99079868962598 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.439615247986195 | bayes_pls_golite062009 |
| nucleic acid binding | 0.423465463321237 | bayes_pls_golite062009 |
| receptor activity | 0.412021469731374 | bayes_pls_golite062009 |
| transcription regulator activity | 0.201295096123951 | bayes_pls_golite062009 |
| DNA binding | 0.105302030107805 | bayes_pls_golite062009 |
| cytokine binding | 0.0441839595209103 | bayes_pls_golite062009 |
|
Region A: Residues: [114-307] |
1 11 21 31 41 51
| | | | | |
1 DSASTPLKIN LHIIYYHPPQ PRKMQFLSLE PLSLLLLKDS FINKSNPEYE SMQHQQILLK 60
61 KLKLHFPRRK ENSWKRSLRS GLIELLNQSF EVRMLTHENN NKKNSYVFRL FDRVSSSTFY 120
121 FFNSLFAYFI ILLRIINEVI LLAINYRPIP LSYNMMDIFV SARQVDLRLQ QACFWPVQYM 180
181 KLWVFRKSKR VAIE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [308-519] |
1 11 21 31 41 51
| | | | | |
1 DYKEYIRFYN NLWLVANDMI FGITMSSFIL ENLHLVVKLI ENITFEYAIK NVRSMVIWLV 60
61 DTPAGLKLNN DICKFIMKLS VWVIDVWSNF LLHCLPWTPF LVQVVAISGF GGASLMIALI 120
121 SDFLSVMTIH IHLLYLASSR LYNWQLRVIY SLLQLFRGKK RNVLRNRIDS YEYDLDQLLL 180
181 GTILFTVLIF FLPTIYVFYA AFALTRVSVM TC
|
| Detection Method: | |
| Confidence: | 116.0 |
| Match: | PF05024.6 |
| Description: | No description for PF05024.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [520-653] |
1 11 21 31 41 51
| | | | | |
1 LAICETMLAF LNHFPLFVTM LRIKDPYRIP SGLNFEIVSF EPLKQDGFAT LYLNCNSKPM 60
61 SLGSMFEHYR KLARRLISHY LSKTTLISLL VGCPVPAIPA EQLYNIQYAM LPTKRISIRK 120
121 LRDLLFHQKK FPYD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
